D. rerio Gene: osbpl6 - ENSDARG00000063730 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063730
Nameosbpl6
Descriptionoxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-222f23.4
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.61e3
  • 4.61e3
84.56
  • 84.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.45e4
  • 1.45e4
51.44
  • 51.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.76e4
49.72
  • 49.72
  • 40.95
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.56
  • 46.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.52
  • 45.52
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.69e4
  • 1.69e4
  • 1.86e4
  • 2.06e4
  • 2.19e4
  • 2.27e4
43.36
  • 43.36
  • 37.68
  • 31.08
  • 26.59
  • 23.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
  • 2.16e4
38.20
  • 38.20
  • 27.60
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.75
  • 37.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.11
  • 33.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.17
  • 30.17
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.10e4
  • 2.10e4
  • 2.24e4
29.70
  • 29.70
  • 25.15
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.55
  • 28.55
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.65
  • 27.65
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.26
  • 27.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000063730.

Cross-references

EnsemblENSDARG00000063730 (osbpl6)
ZFINZDB-GENE-070912-206 (osbpl6)
EMBLBX004991
Uniprot/SPTREMBLB0S523, B0S523_DANRE, E7F2M8, E7F2M8_DANRE

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