D. rerio Gene: mt-nd3 - ENSDARG00000063914 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063914
Namemt-nd3
DescriptionNADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
OrganismDanio rerio (zebrafish)
Synonym(s)mtnd3, nd3
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
10.6
  • 10.6
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
14.0
  • 14.0
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
18.0
  • 18.0
  • 75.5
99.94
  • 99.94
  • 99.75
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
19.3
  • 19.3
  • 24.3
99.94
  • 99.94
  • 99.92
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
20.0
  • 20.0
  • 21.0
99.94
  • 99.94
  • 99.93
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
22.9
  • 22.9
  • 58.0
99.93
  • 99.93
  • 99.81
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
30.0
  • 30.0
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
42.0
  • 42.0
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
45.0
  • 45.0
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
47.7
  • 47.7
99.84
  • 99.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
48.3
  • 48.3
99.84
  • 99.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
58.7
  • 58.7
  • 79.0
99.81
  • 99.81
  • 99.74
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
63.0
  • 63.0
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
74.3
  • 74.3
  • 83.4
  • 93.7
  • 123
  • 213
99.75
  • 99.75
  • 99.72
  • 99.69
  • 99.59
  • 99.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
80.0
  • 80.0
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
91.1
  • 91.1
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
97.6
  • 97.6
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
97.9
  • 97.9
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
105
  • 105
99.65
  • 99.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
110
  • 110
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
131
  • 131
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
151
  • 151
99.50
  • 99.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
166
  • 166
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
211
  • 211
99.30
  • 99.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063914.

Cross-references

EnsemblENSDARG00000063914 (mt-nd3)
ZFINZDB-GENE-011205-9 (mt-nd3)
EMBLAC024175
Uniprot/SWISSPROTNU3M_DANRE, Q9MIY3

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