D. rerio Gene: si:rp71-68n21.9 - ENSDARG00000067751 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000067751
Namesi:rp71-68n21.9
Descriptionsi:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
OrganismDanio rerio (zebrafish)
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
788
  • 788
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.35
  • 81.35
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
  • 1.11e4
70.96
  • 70.96
  • 62.88
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.57
  • 68.57
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.97e3
  • 9.97e3
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.01e4
  • 1.01e4
  • 1.59e4
66.02
  • 66.02
  • 46.61
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.41e4
  • 1.67e4
  • 1.71e4
62.58
  • 62.58
  • 61.33
  • 52.88
  • 44.06
  • 42.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.67
  • 61.67
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.33e4
  • 1.33e4
  • 1.50e4
55.54
  • 55.54
  • 49.76
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.18
  • 50.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.54e4
  • 1.54e4
  • 1.85e4
48.54
  • 48.54
  • 38.13
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.53
  • 48.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.69
  • 47.69
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.62e4
  • 1.62e4
45.67
  • 45.67
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.67e4
  • 1.67e4
44.09
  • 44.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.54
  • 37.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Deuterostomia4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000067751.

Cross-references

EnsemblENSDARG00000067751 (si:rp71-68n21.9)
ZFINZDB-GENE-081105-100 (si:rp71-68n21.9)
EMBLBX511129
Uniprot/SPTREMBLE9QDU6, E9QDU6_DANRE, E9QHV0, E9QHV0_DANRE

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