Gene: PRKAB2 - ENSDARG00000067817 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000067817
Name	PRKAB2
Description	protein kinase, AMP-activated, beta 2 non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9379]
Organism	Danio rerio (zebrafish)
Orthologs(s)	2 orthologs
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	532 532	98.22 98.22	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	791 791	97.35 97.35	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.33e3 1.33e3 4.47e3	95.55 95.55 85.04	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.74e3 1.74e3	94.18 94.18	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage	3.43e3 3.43e3 3.50e3 3.72e3 6.58e3 7.59e3	88.52 88.52 88.27 87.55 77.98 74.60	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	3.65e3 3.65e3	87.78 87.78	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.78e3 3.78e3	87.34 87.34	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	5.14e3 5.14e3 6.19e3	82.81 82.81 79.28	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	5.39e3 5.39e3	81.96 81.96	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.86e3 5.86e3	80.39 80.39	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	6.05e3 6.05e3	79.75 79.75	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	6.40e3 6.40e3	78.57 78.57	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	6.55e3 6.55e3	78.08 78.08	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	6.58e3 6.58e3 8.16e3	77.97 77.97 72.67	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	6.58e3 6.58e3 8.01e3	77.95 77.95 73.19	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	6.91e3 6.91e3	76.88 76.88	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.34e3 7.34e3	75.42 75.42	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	7.51e3 7.51e3	74.86 74.86	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.57e3 7.57e3	74.65 74.65	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	7.71e3 7.71e3	74.20 74.20	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	8.37e3 8.37e3 8.66e3	71.97 71.97 71.02	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	9.24e3 9.24e3	69.06 69.06	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.13 66.13	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.63 53.63	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	46.18 46.18	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	1 species Caenorhabditis elegans (nematode)	2 genes WBGene00010115 aakb-1 WBGene00012928 aakb-2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000067817.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Bilateria	2 genes ENSDARG00000044183 prkab1a ENSDARG00000046143 prkab1b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000067817.

Cross-references

Ensembl	ENSDARG00000067817 (PRKAB2)
HGNC	HGNC:9379 (PRKAB2)
EMBL	CABZ01083446, CABZ01083447, CABZ01083448
Uniprot/SPTREMBL	E7F9H4, E7F9H4_DANRE