D. rerio Gene: ccdc177 - ENSDARG00000067841 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000067841
Nameccdc177
Descriptioncoiled-coil domain containing 177 [Source:ZFIN;Acc:ZDB-GENE-130530-718]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000715
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.26e3
  • 4.26e3
85.73
  • 85.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.61
  • 79.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
  • 1.72e4
72.97
  • 72.97
  • 42.39
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 1.24e4
  • 1.82e4
  • 1.83e4
  • 2.09e4
70.01
  • 70.01
  • 58.56
  • 39.03
  • 38.78
  • 29.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.13e4
  • 1.13e4
  • 1.52e4
62.03
  • 62.03
  • 49.07
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.30e4
  • 1.30e4
  • 1.56e4
56.51
  • 56.51
  • 47.74
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.48
  • 53.48
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.47e4
  • 1.47e4
50.78
  • 50.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.85
  • 49.85
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.41
  • 46.41
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.56
  • 39.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.47
  • 38.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.07
  • 30.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000067841 (ccdc177)
ZFINZDB-GENE-130530-718 (ccdc177)
Uniprot/SPTREMBLE7FBL7, E7FBL7_DANRE

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