D. rerio Gene: fem1a - ENSDARG00000067966 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000067966
Namefem1a
Descriptionfem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
OrganismDanio rerio (zebrafish)
Synonym(s)fi20c04, wu:fi20c04, zgc:63483
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
825
  • 825
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
93.82
  • 93.82
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
  • 8.17e3
92.40
  • 92.40
  • 72.66
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.82e3
  • 4.82e3
83.85
  • 83.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.37
  • 83.37
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.18e3
  • 5.18e3
82.65
  • 82.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.27e3
  • 5.27e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.71
  • 81.71
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.40
  • 80.40
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.25e3
  • 6.25e3
  • 9.67e3
79.07
  • 79.07
  • 67.61
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
  • 1.90e4
76.63
  • 76.63
  • 36.46
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.36e3
  • 7.36e3
  • 8.95e3
  • 1.04e4
  • 1.46e4
  • 1.72e4
75.34
  • 75.34
  • 70.05
  • 65.29
  • 51.18
  • 42.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.44e3
  • 8.44e3
  • 8.98e3
71.73
  • 71.73
  • 69.95
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.52e3
  • 9.52e3
  • 1.01e4
68.11
  • 68.11
  • 66.23
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.93
  • 62.93
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
62.84
  • 62.84
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.02
  • 48.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.09
  • 44.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.66
  • 29.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi10 species12 genesCompare expression
Bilateria17 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000067966.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Metazoa2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000067966.

Cross-references

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