D. rerio Gene: tcnl - ENSDARG00000068088 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068088
Nametcnl
Descriptiontranscobalamin like [Source:ZFIN;Acc:ZDB-GENE-060531-123]
OrganismDanio rerio (zebrafish)
Synonym(s)loc566714, si:dkey-252h13.5, si:dkey-252h13.5gn, wu:fd50g03
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
385
  • 385
  • 2.38e4
98.71
  • 98.71
  • 20.34
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
767
  • 767
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.78
  • 95.78
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.59e3
  • 1.59e3
  • 4.48e3
94.69
  • 94.69
  • 85.01
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.65e3
  • 2.65e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.65e3
  • 2.65e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.77
  • 79.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.72
  • 74.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.86
  • 51.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
  • 2.30e4
33.14
  • 33.14
  • 23.07
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.15
  • 30.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000068088.

Cross-references

EnsemblENSDARG00000068088 (tcnl)
ZFINZDB-GENE-060531-123 (tcnl)
EMBLBC162189, BC162201, BX294376
Uniprot/SPTREMBLA2BFT0, A2BFT0_DANRE

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