D. rerio Gene: atf5a - ENSDARG00000068096 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068096
Nameatf5a
Descriptionactivating transcription factor 5a [Source:ZFIN;Acc:ZDB-GENE-060526-205]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-127j5.5, si:dkey-127j5.5 {eco:0000313|embl:aai63255.1,gn eco:0000313|zfin:zdb-gene-060526-205}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
89.16
  • 89.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.30e3
  • 4.30e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
4.48e3
  • 4.48e3
  • 8.86e3
  • 1.12e4
  • 1.25e4
  • 1.28e4
85.01
  • 85.01
  • 70.32
  • 62.44
  • 58.07
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.94e3
  • 4.94e3
  • 9.43e3
83.47
  • 83.47
  • 68.44
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
  • 5.98e3
81.32
  • 81.32
  • 79.98
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.23e3
  • 6.23e3
  • 1.19e4
79.14
  • 79.14
  • 60.09
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.06
  • 71.06
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.44
  • 67.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.02e4
  • 1.02e4
  • 1.58e4
66.00
  • 66.00
  • 47.01
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.58
  • 64.58
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.13e4
  • 1.13e4
62.06
  • 62.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.47
  • 61.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.31
  • 60.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.14
  • 60.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.07
  • 60.07
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.82
  • 59.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.58
  • 55.58
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
55.38
  • 55.38
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.73
  • 52.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.68
  • 52.68
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.94
  • 51.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.55e4
  • 1.55e4
48.06
  • 48.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.49
  • 39.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000068096 (atf5a)
ZFINZDB-GENE-060526-205 (atf5a)
EMBLBC163255, BC163282, BX294389
Uniprot/SPTREMBLA2BFU3, A2BFU3_DANRE

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