D. rerio Gene: si:ch211-198o12.4 - ENSDARG00000068098 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068098
Namesi:ch211-198o12.4
Descriptionsi:ch211-198o12.4 [Source:ZFIN;Acc:ZDB-GENE-060503-300]
OrganismDanio rerio (zebrafish)
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.57
  • 96.57
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.08e4
  • 2.08e4
30.40
  • 30.40
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.19
  • 26.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.11
  • 26.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
22.97
  • 22.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.32
  • 22.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000068098.

Cross-references

EnsemblENSDARG00000068098 (si:ch211-198o12.4)
ZFINZDB-GENE-060503-300 (si:ch211-198o12.4)
EMBLBC133838, BX247873
Uniprot/SPTREMBLA4FVG3, A4FVG3_DANRE, Q1LY22, Q1LY22_DANRE

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