D. rerio Gene: ch25hl1.2 - ENSDARG00000068138 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068138
Namech25hl1.2
Descriptioncholesterol 25-hydroxylase like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050419-90]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-24l11.9
Orthologs(s)1 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.20
  • 73.20
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.12e4
  • 1.12e4
62.60
  • 62.60
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.21e4
  • 1.21e4
  • 1.72e4
59.43
  • 59.43
  • 42.50
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.38e4
  • 1.38e4
  • 1.62e4
53.90
  • 53.90
  • 45.71
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.50e4
  • 1.50e4
49.93
  • 49.93
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
  • 2.77e4
48.15
  • 48.15
  • 7.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.93
  • 42.93
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.93e4
  • 1.93e4
  • 2.32e4
35.39
  • 35.39
  • 22.29
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.56
  • 32.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.07
  • 29.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.29
  • 28.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.79
  • 23.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e4
  • 2.54e4
14.94
  • 14.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000068138.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000068138.

Cross-references

EnsemblENSDARG00000068138 (ch25hl1.2)
ZFINZDB-GENE-050419-90 (ch25hl1.2)
EMBLBX470164
Uniprot/SWISSPROTC2512_DANRE, Q1LX59

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