D. rerio Gene: tnfsf11 - ENSDARG00000068141 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068141
Nametnfsf11
Descriptiontumor necrosis factor (ligand) superfamily, member 11 [Source:ZFIN;Acc:ZDB-GENE-090805-2]
OrganismDanio rerio (zebrafish)
Synonym(s)rankl

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.34
  • 71.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.39
  • 49.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.55
  • 45.55
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.80e4
  • 1.80e4
39.59
  • 39.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.57
  • 38.57
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.76
  • 36.76
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.42
  • 33.42
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.05e4
  • 2.05e4
  • 2.32e4
31.27
  • 31.27
  • 22.24
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.06e4
  • 2.06e4
  • 2.38e4
31.10
  • 31.10
  • 20.22
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.03
  • 30.03
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.50
  • 29.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.11
  • 27.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000068141 (tnfsf11)
ZFINZDB-GENE-090805-2 (tnfsf11)
EMBLCU986290
Uniprot/SPTREMBLE7F3U1, E7F3U1_DANRE

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