D. rerio Gene: ccni - ENSDARG00000068214 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068214
Nameccni
Descriptioncyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
OrganismDanio rerio (zebrafish)
Synonym(s)im:4967226, wu:fb18c12, wu:fk71g05, zgc:158424, zgc:55449, zgc:85721
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
220
  • 220
  • 272
  • 590
  • 1.62e3
99.27
  • 99.27
  • 99.09
  • 98.03
  • 94.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
226
  • 226
99.25
  • 99.25
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
257
  • 257
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
260
  • 260
  • 1.02e3
  • 1.49e4
99.13
  • 99.13
  • 96.59
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
292
  • 292
  • 380
99.03
  • 99.03
  • 98.73
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
303
  • 303
98.99
  • 98.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
305
  • 305
98.98
  • 98.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
310
  • 310
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
331
  • 331
  • 344
98.89
  • 98.89
  • 98.85
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
342
  • 342
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
345
  • 345
  • 481
  • 537
98.85
  • 98.85
  • 98.39
  • 98.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
353
  • 353
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
359
  • 359
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
362
  • 362
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
378
  • 378
98.74
  • 98.74
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
386
  • 386
  • 540
98.71
  • 98.71
  • 98.20
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
429
  • 429
  • 490
  • 520
  • 588
  • 742
  • 967
  • 1.14e3
  • 2.47e3
  • 2.62e3
  • 2.91e3
  • 3.41e3
  • 3.46e3
  • 5.48e3
  • 6.63e3
  • 1.28e4
  • 1.31e4
  • 1.43e4
  • 1.44e4
98.57
  • 98.57
  • 98.36
  • 98.26
  • 98.04
  • 97.52
  • 96.77
  • 96.20
  • 91.74
  • 91.23
  • 90.26
  • 88.59
  • 88.41
  • 81.66
  • 77.79
  • 57.23
  • 56.21
  • 52.23
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
430
  • 430
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
444
  • 444
  • 459
  • 488
  • 818
  • 858
  • 1.03e3
  • 1.21e3
  • 2.43e3
  • 3.28e3
  • 3.62e3
98.52
  • 98.52
  • 98.47
  • 98.37
  • 97.27
  • 97.13
  • 96.57
  • 95.94
  • 91.86
  • 89.03
  • 87.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
512
  • 512
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
686
  • 686
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
688
  • 688
97.70
  • 97.70
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.57e3
  • 1.57e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.70e3
  • 1.70e3
94.30
  • 94.30
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.71e3
  • 1.71e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
2.75e3
  • 2.75e3
  • 3.91e3
  • 3.92e3
  • 4.00e3
  • 4.05e3
  • 7.11e3
90.80
  • 90.80
  • 86.91
  • 86.89
  • 86.61
  • 86.45
  • 76.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.62e3
  • 4.62e3
  • 5.31e3
  • 6.56e3
  • 7.59e3
  • 8.16e3
84.52
  • 84.52
  • 82.22
  • 78.02
  • 74.60
  • 72.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.60e3
  • 5.60e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.87e3
  • 5.87e3
80.35
  • 80.35
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
  • 1.34e4
56.53
  • 56.53
  • 55.16
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
55.38
  • 55.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

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