D. rerio Gene: cngb1a - ENSDARG00000068242 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068242
Namecngb1a
Descriptioncyclic nucleotide gated channel beta 1a [Source:ZFIN;Acc:ZDB-GENE-050419-164]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-160j6.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.63e3
  • 2.63e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.20e3
  • 5.20e3
  • 8.10e3
82.60
  • 82.60
  • 72.88
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.58e3
  • 8.58e3
71.27
  • 71.27
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
9.57e3
  • 9.57e3
  • 2.21e4
67.94
  • 67.94
  • 26.01
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.38e4
  • 1.38e4
53.87
  • 53.87
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.44e4
  • 1.44e4
  • 1.67e4
51.83
  • 51.83
  • 44.06
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 2.59e4
39.40
  • 39.40
  • 13.28
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.77
  • 26.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.71
  • 24.71
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.63
  • 23.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.49e4
  • 2.49e4
16.46
  • 16.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000068242 (cngb1a)
ZFINZDB-GENE-050419-164 (cngb1a)
Uniprot/SPTREMBLF1QZH8, F1QZH8_DANRE

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