D. rerio Gene: rwdd - ENSDARG00000068256 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068256
Namerwdd
DescriptionRWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-192e21.1, zgc:103545
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.14e3
  • 2.14e3
  • 2.24e3
  • 2.84e3
  • 3.15e3
  • 3.30e3
92.82
  • 92.82
  • 92.50
  • 90.49
  • 89.44
  • 88.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.27e3
  • 2.27e3
92.39
  • 92.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.48e3
  • 2.48e3
  • 2.68e3
91.69
  • 91.69
  • 91.03
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.64e3
  • 2.64e3
  • 4.07e3
91.16
  • 91.16
  • 86.36
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
  • 3.98e3
88.81
  • 88.81
  • 86.68
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.46e3
  • 3.46e3
  • 3.61e3
88.43
  • 88.43
  • 87.93
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.48e3
  • 3.48e3
  • 1.50e4
88.35
  • 88.35
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.15
  • 88.15
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
87.01
  • 87.01
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
87.00
  • 87.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
  • 4.54e3
86.72
  • 86.72
  • 84.81
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.19
  • 85.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.43e3
  • 4.43e3
85.17
  • 85.17
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
81.08
  • 81.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.00
  • 81.00
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
6.40e3
  • 6.40e3
  • 6.97e3
  • 8.96e3
  • 9.96e3
78.56
  • 78.56
  • 76.66
  • 69.99
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.85e3
  • 6.85e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
7.97e3
  • 7.97e3
  • 7.97e3
  • 8.54e3
  • 1.05e4
73.32
  • 73.32
  • 73.32
  • 71.42
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.13e3
  • 9.13e3
  • 9.13e3
  • 9.96e3
69.43
  • 69.43
  • 69.43
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.97e3
  • 9.97e3
66.62
  • 66.62
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.83
  • 60.83
AEIR
  • AEIR
UBERON:2000164ventral mesenchyme
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
  • 1.19e4
  • 1.19e4
59.99
  • 59.99
  • 59.99
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000068256.

Cross-references

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