D. rerio Gene: astn1 - ENSDARG00000068323 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068323
Nameastn1
Descriptionastrotactin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-140]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:113405, zgc:158703
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
  • 1.47e4
  • 1.49e4
95.52
  • 95.52
  • 50.84
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
  • 4.69e3
93.29
  • 93.29
  • 84.30
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.52
  • 89.52
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
4.01e3
  • 4.01e3
  • 7.64e3
  • 1.03e4
  • 1.25e4
  • 1.37e4
  • 1.50e4
  • 1.51e4
  • 1.53e4
  • 1.54e4
  • 1.54e4
86.59
  • 86.59
  • 74.42
  • 65.51
  • 58.30
  • 54.11
  • 49.65
  • 49.44
  • 48.67
  • 48.58
  • 48.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
4.44e3
  • 4.44e3
  • 8.56e3
  • 1.05e4
  • 1.25e4
  • 1.27e4
85.13
  • 85.13
  • 71.35
  • 64.89
  • 58.11
  • 57.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.90e3
  • 4.90e3
83.61
  • 83.61
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.93e3
  • 4.93e3
  • 6.32e3
  • 6.83e3
  • 7.69e3
  • 7.86e3
83.49
  • 83.49
  • 78.84
  • 77.12
  • 74.24
  • 73.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
6.48e3
  • 6.48e3
  • 8.34e3
  • 8.44e3
  • 9.60e3
  • 9.99e3
  • 1.09e4
  • 1.13e4
  • 1.16e4
  • 1.27e4
  • 1.31e4
  • 1.33e4
  • 1.34e4
  • 1.35e4
  • 1.40e4
  • 1.41e4
  • 1.50e4
78.29
  • 78.29
  • 72.07
  • 71.72
  • 67.85
  • 66.55
  • 63.40
  • 62.03
  • 61.16
  • 57.58
  • 55.98
  • 55.58
  • 55.20
  • 54.65
  • 53.06
  • 52.84
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.81e3
  • 6.81e3
  • 7.13e3
  • 1.08e4
77.20
  • 77.20
  • 76.14
  • 63.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.02e3
  • 7.02e3
76.51
  • 76.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.20e3
  • 7.20e3
  • 9.56e3
  • 1.11e4
  • 1.15e4
75.88
  • 75.88
  • 67.99
  • 62.98
  • 61.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.67e3
  • 7.67e3
74.31
  • 74.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.53
  • 71.53
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
68.67
  • 68.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.08
  • 65.08
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
64.32
  • 64.32
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.74
  • 63.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.83
  • 58.83
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.40
  • 56.40
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.37e4
  • 1.37e4
54.25
  • 54.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.88
  • 53.88
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.43e4
  • 1.43e4
52.19
  • 52.19
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
  • 1.48e4
50.94
  • 50.94
  • 50.31
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.64e4
  • 1.64e4
  • 1.79e4
45.16
  • 45.16
  • 40.06
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.14
  • 42.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.33
  • 38.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.94
  • 35.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.38
  • 35.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.50
  • 32.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

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