D. rerio Gene: mmab - ENSDARG00000068344 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068344
Namemmab
Descriptionmethylmalonic aciduria (cobalamin deficiency) cblB type [Source:ZFIN;Acc:ZDB-GENE-060526-232]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-189p24.5
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
85.27
  • 85.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
  • 8.66e3
81.21
  • 81.21
  • 70.99
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
80.31
  • 80.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
80.12
  • 80.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.66
  • 79.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.15e3
  • 6.15e3
  • 9.72e3
  • 1.23e4
  • 1.26e4
79.42
  • 79.42
  • 67.47
  • 58.78
  • 57.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.88
  • 78.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.26
  • 78.26
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.64e3
  • 6.64e3
77.78
  • 77.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
  • 7.00e3
76.89
  • 76.89
  • 76.58
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
76.21
  • 76.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.25e3
  • 7.25e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.26e3
  • 7.26e3
  • 1.37e4
75.68
  • 75.68
  • 54.04
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.63
  • 75.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.36e3
  • 7.36e3
75.37
  • 75.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
7.81e3
  • 7.81e3
  • 9.23e3
  • 1.27e4
  • 1.28e4
  • 1.41e4
73.84
  • 73.84
  • 69.11
  • 57.37
  • 57.20
  • 52.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
9.45e3
  • 9.45e3
  • 9.50e3
  • 9.74e3
  • 1.02e4
  • 1.06e4
  • 1.37e4
  • 1.37e4
  • 1.38e4
  • 1.39e4
  • 1.44e4
68.36
  • 68.36
  • 68.18
  • 67.38
  • 66.00
  • 64.55
  • 54.11
  • 54.03
  • 53.72
  • 53.43
  • 51.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.54e3
  • 9.54e3
  • 1.27e4
  • 1.45e4
68.06
  • 68.06
  • 57.50
  • 51.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
1.03e4
  • 1.03e4
  • 1.10e4
  • 1.14e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.24e4
  • 1.29e4
  • 1.29e4
  • 1.43e4
  • 1.44e4
  • 1.46e4
  • 1.46e4
  • 1.47e4
  • 1.47e4
  • 1.47e4
  • 1.47e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.50e4
  • 1.54e4
  • 1.58e4
65.61
  • 65.61
  • 63.32
  • 61.75
  • 59.08
  • 59.08
  • 59.08
  • 58.32
  • 58.32
  • 56.65
  • 56.65
  • 52.29
  • 51.68
  • 51.21
  • 51.12
  • 50.89
  • 50.87
  • 50.77
  • 50.72
  • 50.59
  • 50.37
  • 50.31
  • 49.75
  • 48.35
  • 47.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.07e4
  • 1.07e4
  • 1.12e4
  • 1.40e4
  • 1.41e4
  • 1.41e4
  • 1.43e4
64.17
  • 64.17
  • 62.51
  • 53.00
  • 52.87
  • 52.65
  • 52.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.08
  • 58.08
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.26e4
  • 1.26e4
57.95
  • 57.95
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.32e4
  • 1.32e4
  • 1.36e4
55.74
  • 55.74
  • 54.60
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.41e4
  • 1.41e4
52.74
  • 52.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSDARG00000068344.

Cross-references

EnsemblENSDARG00000068344 (mmab)
ZFINZDB-GENE-060526-232 (mmab)
EMBLBX510366
Uniprot/SPTREMBLA2BGN0, A2BGN0_DANRE

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