Gene: nfkbie - ENSDARG00000068367 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000068367
Name	nfkbie
Description	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon [Source:ZFIN;Acc:ZDB-GENE-061215-132]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:158276
Orthologs(s)	16 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.96e3 1.96e3	93.46 93.46	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	2.11e3 2.11e3	92.94 92.94	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	2.31e3 2.31e3	92.27 92.27	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	2.86e3 2.86e3	90.43 90.43	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.03e3 3.03e3	89.87 89.87	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	3.18e3 3.18e3	89.34 89.34	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	4.18e3 4.18e3	86.02 86.02	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	4.88e3 4.88e3	83.66 83.66	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.52e3 5.52e3	81.51 81.51	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	5.54e3 5.54e3	81.44 81.44	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	5.62e3 5.62e3	81.19 81.19	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	6.27e3 6.27e3 8.07e3	79.01 79.01 72.99	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	7.30e3 7.30e3 1.01e4	75.57 75.57 66.34	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	7.33e3 7.33e3	75.47 75.47	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	7.40e3 7.40e3 1.00e4	75.24 75.24 66.52	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	8.17e3 8.17e3 1.12e4	72.66 72.66 62.40	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	8.85e3 8.85e3	70.36 70.36	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	9.04e3 9.04e3 9.56e3 9.80e3 1.12e4 1.25e4	69.73 69.73 67.98 67.19 62.60 58.26	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	9.22e3 9.22e3	69.13 69.13	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	9.23e3 9.23e3 9.40e3	69.09 69.09 68.53	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.57e3 9.57e3	67.94 67.94	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.04e4 1.04e4	65.05 65.05	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.12e4 1.12e4	62.37 62.37	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.83 60.83	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000146232 NFKBIE ENSMUSG00000023947 Nfkbie ENSPTRG00000018219 NFKBIE ENSGGOG00000008901 NFKBIE ENSMMUG00000022689 NFKBIE ENSRNOG00000019907 Nfkbie ENSBTAG00000013705 NFKBIE ENSSSCG00000001703 NFKBIE ENSECAG00000019914 NFKBIE ENSOCUG00000017894 NFKBIE ENSCAFG00000001985 NFKBIE ENSFCAG00000009769 NFKBIE ENSCPOG00000020455 NFKBIE ENSMODG00000018929 NFKBIE ENSGALG00000010171 NFKBIE ENSXETG00000014799 nfkbie	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000068367.

Cross-references

Ensembl	ENSDARG00000068367 (nfkbie)
ZFIN	ZDB-GENE-061215-132 (nfkbie)
EMBL	CABZ01086483
Uniprot/SPTREMBL	F1QEW8, F1QEW8_DANRE