D. rerio Gene: ralgps1 - ENSDARG00000068370 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068370
Nameralgps1
DescriptionRal GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
OrganismDanio rerio (zebrafish)
Synonym(s)a6h8s8, si:dkey-191c17.1, zgc:165535
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.44e3
  • 3.44e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.93e3
  • 9.93e3
  • 1.16e4
66.74
  • 66.74
  • 61.24
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
  • 1.40e4
  • 2.30e4
56.63
  • 56.63
  • 53.16
  • 22.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.55e4
  • 1.55e4
48.15
  • 48.15
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.03
  • 45.03
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.66e4
  • 1.66e4
  • 2.21e4
44.51
  • 44.51
  • 26.11
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.17
  • 42.17
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.17
  • 25.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000068370.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000068370.

Cross-references

EnsemblENSDARG00000068370 (ralgps1)
ZFINZDB-GENE-070720-16 (ralgps1)
EMBLBC146736, CR361562, CT573394
Uniprot/SWISSPROTB0UXH6, RGPS1_DANRE

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