D. rerio Gene: gpx4a - ENSDARG00000068478 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068478
Namegpx4a
Descriptionglutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb563, cb691, phgpxa, sb:cb563, wu:fb82e03, zgc:92253
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
44.0
  • 44.0
  • 7.47e3
  • 9.25e3
99.86
  • 99.86
  • 74.99
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
184
  • 184
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
213
  • 213
  • 220
  • 328
  • 361
  • 468
99.29
  • 99.29
  • 99.27
  • 98.91
  • 98.79
  • 98.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
232
  • 232
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
243
  • 243
  • 274
99.19
  • 99.19
  • 99.08
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
448
  • 448
  • 5.03e3
98.50
  • 98.50
  • 83.16
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
604
  • 604
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
682
  • 682
  • 970
97.72
  • 97.72
  • 96.76
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
718
  • 718
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
888
  • 888
  • 3.52e3
97.03
  • 97.03
  • 88.21
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
1.54e3
  • 1.54e3
  • 2.55e3
  • 5.77e3
94.85
  • 94.85
  • 91.46
  • 80.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
92.00
  • 92.00
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.67e3
  • 2.67e3
91.06
  • 91.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.06
  • 90.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.06e3
  • 5.06e3
83.06
  • 83.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.44
  • 78.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.05e3
  • 7.05e3
76.38
  • 76.38
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.90
  • 74.90
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.60e3
  • 7.60e3
  • 9.01e3
74.54
  • 74.54
  • 69.82
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.97e3
  • 7.97e3
  • 9.67e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.03e4
  • 1.05e4
  • 1.05e4
73.32
  • 73.32
  • 67.63
  • 67.63
  • 66.65
  • 66.65
  • 66.65
  • 65.61
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.00e4
  • 1.00e4
66.45
  • 66.45
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.10e4
  • 1.10e4
  • 1.15e4
  • 1.17e4
63.32
  • 63.32
  • 61.53
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.66
  • 61.66
AEIR
  • AEIR
UBERON:2001179epidermal superficial stratum
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta3 genesCompare expression
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068478.

Cross-references

EnsemblENSDARG00000068478 (gpx4a)
ZFINZDB-GENE-030410-2 (gpx4a)
Uniprot/SPTREMBLQ6DHK6, Q6DHK6_DANRE

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