D. rerio Gene: htr5al - ENSDARG00000068557 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068557
Namehtr5al
Description5-hydroxytryptamine (serotonin) receptor 5A like [Source:ZFIN;Acc:ZDB-GENE-030616-574]
OrganismDanio rerio (zebrafish)
Synonym(s)htr5a, si:zc12p8.3
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
69.77
  • 69.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
  • 1.65e4
57.41
  • 57.41
  • 44.81
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.52
  • 56.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.65
  • 51.65
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.51
  • 51.51
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
  • 2.27e4
51.35
  • 51.35
  • 24.07
AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.52e4
  • 1.52e4
  • 1.57e4
  • 1.63e4
49.21
  • 49.21
  • 47.41
  • 45.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.60e4
  • 1.60e4
  • 1.61e4
  • 1.77e4
46.36
  • 46.36
  • 46.00
  • 40.65
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.33
  • 44.33
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.85
  • 42.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.77e4
  • 1.77e4
40.71
  • 40.71
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.83e4
  • 1.83e4
  • 1.83e4
38.62
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.86e4
  • 1.86e4
37.72
  • 37.72
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
  • 2.21e4
  • 2.28e4
37.08
  • 37.08
  • 25.89
  • 23.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.88e4
  • 1.88e4
37.04
  • 37.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.05
  • 35.05
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.22
  • 23.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000068557.

Cross-references

EnsemblENSDARG00000068557 (htr5al)
ZFINZDB-GENE-030616-574 (htr5al)
EMBLAL772146, BC129143
Uniprot/SPTREMBLQ7ZZ32, Q7ZZ32_DANRE

Do not show this banner again