D. rerio Gene: cnot11 - ENSDARG00000068596 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068596
Namecnot11
DescriptionCCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
OrganismDanio rerio (zebrafish)
Synonym(s)fj49e01, wu:fj49e01, zgc:163002
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
  • 1.50e4
91.10
  • 91.10
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
  • 2.81e3
  • 2.87e3
  • 2.87e3
  • 3.00e3
  • 3.19e3
  • 3.59e3
  • 3.78e3
  • 3.90e3
  • 4.67e3
  • 4.69e3
  • 4.69e3
  • 5.03e3
  • 5.76e3
  • 1.38e4
  • 1.42e4
90.74
  • 90.74
  • 90.61
  • 90.39
  • 90.38
  • 89.96
  • 89.31
  • 87.99
  • 87.34
  • 86.93
  • 84.37
  • 84.31
  • 84.30
  • 83.17
  • 80.72
  • 53.85
  • 52.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.79e3
  • 2.79e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.80e3
  • 2.80e3
  • 3.17e3
  • 5.77e3
  • 8.97e3
90.64
  • 90.64
  • 89.40
  • 80.69
  • 69.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.33
  • 90.33
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
3.17e3
  • 3.17e3
  • 3.18e3
  • 3.67e3
  • 3.68e3
  • 4.20e3
  • 4.59e3
89.40
  • 89.40
  • 89.36
  • 87.72
  • 87.67
  • 85.93
  • 84.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.39e3
  • 3.39e3
  • 3.55e3
  • 3.63e3
  • 3.98e3
  • 4.48e3
  • 4.56e3
  • 4.68e3
  • 4.85e3
  • 7.38e3
  • 8.74e3
88.65
  • 88.65
  • 88.13
  • 87.86
  • 86.67
  • 85.01
  • 84.74
  • 84.35
  • 83.75
  • 75.30
  • 70.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
  • 8.68e3
88.63
  • 88.63
  • 70.95
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.46e3
  • 3.46e3
88.41
  • 88.41
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
3.86e3
  • 3.86e3
  • 5.45e3
  • 5.97e3
  • 6.23e3
  • 6.68e3
87.08
  • 87.08
  • 81.77
  • 80.01
  • 79.15
  • 77.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.18e3
  • 4.18e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.12
  • 85.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
  • 1.30e4
81.56
  • 81.56
  • 56.34
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.97e3
  • 5.97e3
  • 5.99e3
  • 6.58e3
80.00
  • 80.00
  • 79.96
  • 77.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.16e3
  • 6.16e3
  • 7.21e3
79.39
  • 79.39
  • 75.86
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.95
  • 77.95
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
  • 8.96e3
77.54
  • 77.54
  • 69.99
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.32
  • 77.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.72
  • 76.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.27e3
  • 7.27e3
75.66
  • 75.66
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.61e3
  • 7.61e3
74.53
  • 74.53
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.28
  • 74.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.19
  • 74.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.93
  • 69.93
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.36
  • 53.36
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.53
  • 31.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000068596 (cnot11)
ZFINZDB-GENE-030131-8068 (cnot11)
EMBLBC139685, CU914623
Uniprot/SPTREMBLF8W474, F8W474_DANRE
Uniprot/SWISSPROTA4QP78, CNO11_DANRE

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