Gene: HTRA2 (1 to many) - ENSDARG00000068667 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000068667
Name	HTRA2 (1 to many)
Description	si:dkey-19p15.4 [Source:ZFIN;Acc:ZDB-GENE-081028-23]
Organism	Danio rerio (zebrafish)
Synonym(s)	omi, park13, prss25
Orthologs(s)	1 orthologs
Paralog(s)	20 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	8.15e3 8.15e3	72.70 72.70	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	8.82e3 8.82e3 9.81e3	70.46 70.46 67.15	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	9.54e3 9.54e3 1.55e4	68.07 68.07 47.97	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.07e4 1.07e4	64.33 64.33	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.85 59.85	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.22e4 1.22e4 1.79e4	59.22 59.22 40.13	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.23e4 1.23e4	58.87 58.87	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.25e4 1.25e4	58.16 58.16	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.35e4 1.35e4 1.84e4	54.78 54.78 38.37	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.89 53.89	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.41e4 1.41e4	52.95 52.95	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.48e4 1.48e4	50.40 50.40	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.36 48.36	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.57e4 1.57e4	47.50 47.50	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.58e4 1.58e4	47.21 47.21	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	1.63e4 1.63e4 1.63e4 1.79e4 2.08e4 2.77e4	45.42 45.42 45.28 39.97 30.30 7.41	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.66 44.66	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.69e4 1.69e4	43.51 43.51	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.88e4 1.88e4	36.98 36.98	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.00e4 2.00e4	33.01 33.01	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.01e4 2.01e4	32.75 32.75	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	2.04e4 2.04e4	31.55 31.55	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.20e4 2.20e4	26.33 26.33	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.36e4 2.36e4	20.97 20.97	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Xenopus tropicalis (western clawed frog)	1 gene ENSXETG00000032241 HTRA2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000068667.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	18 genes ENSDARG00000070138 HTRA2 (1 to many) ENSDARG00000089070 HTRA2 (1 to many) ENSDARG00000092061 HTRA2 (1 to many) ENSDARG00000092094 HTRA2 (1 to many) ENSDARG00000092133 HTRA2 (1 to many) ENSDARG00000092202 HTRA2 (1 to many) ENSDARG00000092380 HTRA2 (1 to many) ENSDARG00000092625 HTRA2 (1 to many) ENSDARG00000093005 HTRA2 (1 to many) ENSDARG00000093963 HTRA2 (1 to many) ENSDARG00000094403 HTRA2 (1 to many) ENSDARG00000094741 HTRA2 (1 to many) ENSDARG00000094749 HTRA2 (1 to many) ENSDARG00000094878 HTRA2 (1 to many) ENSDARG00000094995 HTRA2 (1 to many) ENSDARG00000095314 HTRA2 (1 to many) ENSDARG00000095545 HTRA2 (1 to many) ENSDARG00000095687 HTRA2 (1 to many)	Compare expression	[+]
Euteleostomi	20 genes ENSDARG00000070138 HTRA2 (1 to many) ENSDARG00000076713 HTRA2 (1 to many) ENSDARG00000089070 HTRA2 (1 to many) ENSDARG00000092061 HTRA2 (1 to many) ENSDARG00000092094 HTRA2 (1 to many) ENSDARG00000092133 HTRA2 (1 to many) ENSDARG00000092202 HTRA2 (1 to many) ENSDARG00000092380 HTRA2 (1 to many) ENSDARG00000092625 HTRA2 (1 to many) ENSDARG00000093005 HTRA2 (1 to many) ENSDARG00000093963 HTRA2 (1 to many) ENSDARG00000094403 HTRA2 (1 to many) ENSDARG00000094741 HTRA2 (1 to many) ENSDARG00000094749 HTRA2 (1 to many) ENSDARG00000094878 HTRA2 (1 to many) ENSDARG00000094995 HTRA2 (1 to many) ENSDARG00000095314 HTRA2 (1 to many) ENSDARG00000095444 HTRA2 (1 to many) ENSDARG00000095545 HTRA2 (1 to many) ENSDARG00000095687 HTRA2 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000068667.

Cross-references

Ensembl	ENSDARG00000068667 (HTRA2 (1 to many))
HGNC	HGNC:14348 (HTRA2 (1 to many))
ZFIN	ZDB-GENE-081028-23 (si:dkey-19p15.4)
EMBL	CR848040
Uniprot/SPTREMBL	F8W2H7, F8W2H7_DANRE, F8W342, F8W342_DANRE, F8W4N9, F8W4N9_DANRE, F8W5A5, F8W5A5_DANRE