Gene: tmem168a - ENSDARG00000068705 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000068705
Name	tmem168a
Description	transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-192l17.1, tmem168
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	2.52e3 2.52e3	91.57 91.57	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	3.31e3 3.31e3	88.91 88.91	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	3.49e3 3.49e3 3.56e3	88.33 88.33 88.08	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	5.55e3 5.55e3 6.04e3	81.42 81.42 79.78	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	6.68e3 6.68e3	77.63 77.63	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	6.77e3 6.77e3	77.32 77.32	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	7.11e3 7.11e3 8.95e3 9.18e3 1.37e4 1.56e4	76.18 76.18 70.03 69.25 54.16 47.84	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	7.20e3 7.20e3 1.16e4	75.90 75.90 61.24	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	8.31e3 8.31e3	72.18 72.18	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	8.42e3 8.42e3	71.80 71.80	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.44e3 8.44e3	71.73 71.73	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	8.70e3 8.70e3	70.87 70.87	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	9.07e3 9.07e3	69.63 69.63	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	9.43e3 9.43e3 1.09e4	68.43 68.43 63.47	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	9.58e3 9.58e3	67.93 67.93	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	9.96e3 9.96e3	66.64 66.64	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.29 66.29	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.61 63.61	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.21e4 1.21e4	59.51 59.51	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.22e4 1.22e4	59.21 59.21	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.25e4 1.25e4	58.04 58.04	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.35e4 1.35e4 1.49e4	54.95 54.95 50.08	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.86 40.86	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.00e4 2.00e4	33.13 33.13	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Vertebrata	1 gene ENSDARG00000062168 tmem168b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000068705.

Cross-references

Ensembl	ENSDARG00000068705 (tmem168a)
ZFIN	ZDB-GENE-050419-97 (tmem168a)
EMBL	BX950217
Uniprot/SWISSPROT	Q1LUD1, T168A_DANRE