D. rerio Gene: cox5b2 - ENSDARG00000068738 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068738
Namecox5b2
Descriptioncytochrome c oxidase subunit Vb 2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
OrganismDanio rerio (zebrafish)
Synonym(s)mg:cb01c08, zgc:153978, zgc:173509
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
171
  • 171
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
214
  • 214
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
248
  • 248
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
285
  • 285
99.05
  • 99.05
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
332
  • 332
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
340
  • 340
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
512
  • 512
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
522
  • 522
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
674
  • 674
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.01e3
  • 1.01e3
  • 1.07e4
96.62
  • 96.62
  • 64.29
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
  • 3.26e3
96.44
  • 96.44
  • 89.07
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.58e3
  • 1.58e3
  • 5.13e3
94.71
  • 94.71
  • 82.81
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.37
  • 94.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.12
  • 91.12
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
3.06e3
  • 3.06e3
  • 1.31e4
  • 1.43e4
  • 1.48e4
  • 1.64e4
89.76
  • 89.76
  • 56.27
  • 52.03
  • 50.42
  • 45.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
87.95
  • 87.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.87
  • 67.87
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.37e4
  • 1.37e4
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.60
  • 50.60
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.84
  • 36.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.91e4
  • 1.91e4
36.06
  • 36.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068738.

Cross-references

EnsemblENSDARG00000068738 (cox5b2)
ZFINZDB-GENE-060825-71 (cox5b2)
EMBLBC122442, BC153399, BC165491, CU929100
Uniprot/SPTREMBLA8E500, A8E500_DANRE, F1QPN7, F1QPN7_DANRE, Q0P3U4, Q0P3U4_DANRE

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