D. rerio Gene: CDCA2 - ENSDARG00000068759 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068759
NameCDCA2
Descriptionsi:ch211-244o22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3271]
OrganismDanio rerio (zebrafish)
Synonym(s)fc32e05, ppp1r81, repo-man, wu:fc32e05, wu:fi04h07

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
996
  • 996
  • 1.46e3
  • 2.99e3
  • 3.57e3
  • 3.72e3
96.67
  • 96.67
  • 95.11
  • 90.00
  • 88.05
  • 87.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e3
  • 1.12e3
96.25
  • 96.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.66e3
  • 2.66e3
91.09
  • 91.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.77e3
  • 2.77e3
90.74
  • 90.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.42
  • 90.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.25
  • 90.25
AEIR
  • AEIR
UBERON:2000098proliferative region
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
2.99e3
  • 2.99e3
  • 3.32e3
  • 3.32e3
  • 3.32e3
  • 4.27e3
  • 4.27e3
  • 4.27e3
  • 4.27e3
  • 4.27e3
  • 4.27e3
  • 9.33e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
  • 1.05e4
90.00
  • 90.00
  • 88.89
  • 88.89
  • 88.89
  • 85.71
  • 85.71
  • 85.71
  • 85.71
  • 85.71
  • 85.71
  • 68.74
  • 66.66
  • 66.66
  • 66.66
  • 66.66
  • 64.99
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
3.00e3
  • 3.00e3
  • 3.82e3
  • 4.33e3
  • 4.34e3
  • 4.38e3
  • 5.55e3
  • 5.87e3
  • 5.90e3
  • 7.62e3
  • 1.15e4
89.97
  • 89.97
  • 87.20
  • 85.50
  • 85.47
  • 85.33
  • 81.41
  • 80.36
  • 80.25
  • 74.48
  • 61.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
3.28e3
  • 3.28e3
  • 3.65e3
  • 3.70e3
  • 4.20e3
  • 4.35e3
  • 6.90e3
89.01
  • 89.01
  • 87.79
  • 87.63
  • 85.95
  • 85.45
  • 76.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
3.34e3
  • 3.34e3
  • 5.03e3
  • 5.63e3
  • 5.75e3
  • 5.92e3
  • 6.12e3
  • 6.21e3
  • 6.23e3
  • 6.61e3
  • 7.20e3
  • 1.03e4
  • 1.09e4
  • 1.12e4
  • 1.24e4
  • 1.37e4
  • 1.39e4
  • 1.47e4
  • 1.49e4
88.82
  • 88.82
  • 83.16
  • 81.16
  • 80.75
  • 80.17
  • 79.51
  • 79.21
  • 79.15
  • 77.86
  • 75.89
  • 65.49
  • 63.38
  • 62.48
  • 58.56
  • 54.18
  • 53.44
  • 50.90
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.96e3
  • 3.96e3
86.74
  • 86.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.34
  • 86.34
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.28e3
  • 4.28e3
  • 6.83e3
  • 1.14e4
85.66
  • 85.66
  • 77.14
  • 61.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.54e3
  • 4.54e3
84.82
  • 84.82
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.55
  • 81.55
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.17e3
  • 6.17e3
79.36
  • 79.36
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.33
  • 79.33
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
  • 1.90e4
78.87
  • 78.87
  • 36.29
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.39
  • 78.39
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
  • 1.01e4
76.21
  • 76.21
  • 66.25
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.85e3
  • 8.85e3
  • 2.05e4
70.38
  • 70.38
  • 31.24
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.94e3
  • 8.94e3
70.05
  • 70.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
66.99
  • 66.99
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.01e4
  • 1.01e4
  • 1.17e4
  • 1.18e4
66.03
  • 66.03
  • 60.72
  • 60.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.29e4
58.00
  • 58.00
  • 56.76
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.89
  • 51.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.55
  • 51.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.32
  • 50.32
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.95
  • 40.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000068759 (CDCA2)
HGNCHGNC:14623 (CDCA2)
ZFINZDB-GENE-030131-3271 (si:ch211-244o22.2)
EMBLCR392037
Uniprot/SPTREMBLA2CEF0, A2CEF0_DANRE

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