D. rerio Gene: purba - ENSDARG00000068822 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068822
Namepurba
Descriptionpurine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-202n14.1, si:dkey-202n14.1 {eco:0000313|embl:aai62478.1,gn eco:0000313|zfin:zdb-gene-060531-100}
Orthologs(s)14 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
  • 3.46e3
94.83
  • 94.83
  • 88.43
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.78e3
  • 1.78e3
  • 1.49e4
94.05
  • 94.05
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.92e3
  • 1.92e3
  • 2.35e3
  • 1.21e4
93.58
  • 93.58
  • 92.14
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.94e3
  • 1.94e3
  • 3.00e3
93.51
  • 93.51
  • 89.97
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.95e3
  • 1.95e3
  • 2.72e3
  • 3.70e3
  • 3.83e3
  • 3.89e3
93.46
  • 93.46
  • 90.89
  • 87.61
  • 87.17
  • 86.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.36
  • 93.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.91
  • 92.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.82
  • 92.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.48e3
  • 2.48e3
  • 1.46e4
91.70
  • 91.70
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.48e3
  • 3.48e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.48e3
  • 3.48e3
88.33
  • 88.33
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.42
  • 87.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.87e3
  • 3.87e3
87.05
  • 87.05
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.33
  • 86.33
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.28e3
  • 4.28e3
85.66
  • 85.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.57e3
  • 4.57e3
  • 4.83e3
84.69
  • 84.69
  • 83.82
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.02e3
  • 5.02e3
  • 6.44e3
83.19
  • 83.19
  • 78.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.38e3
  • 5.38e3
82.00
  • 82.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.32
  • 77.32
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
7.13e3
  • 7.13e3
  • 1.08e4
  • 1.40e4
  • 1.50e4
  • 1.50e4
76.12
  • 76.12
  • 63.91
  • 53.18
  • 49.81
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.06
  • 76.06
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.57e3
  • 8.57e3
71.30
  • 71.30
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.64
  • 67.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata3 genesCompare expression
Metazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068822.

Cross-references

EnsemblENSDARG00000068822 (purba)
ZFINZDB-GENE-060531-100 (purba)
EMBLBC162478, BC162482, BX322550
Uniprot/SPTREMBLA2BFY7, A2BFY7_DANRE

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