D. rerio Gene: si:ch73-95l15.3 - ENSDARG00000068846 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068846
Namesi:ch73-95l15.3
Descriptionsi:ch73-95l15.3 [Source:ZFIN;Acc:ZDB-GENE-131125-23]
OrganismDanio rerio (zebrafish)
Orthologs(s)5 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
792
  • 792
97.35
  • 97.35
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.93
  • 88.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.52e3
  • 5.52e3
  • 6.40e3
81.52
  • 81.52
  • 78.59
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.24e3
  • 6.24e3
  • 1.27e4
79.10
  • 79.10
  • 57.64
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.72e3
  • 7.72e3
74.16
  • 74.16
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.38
  • 72.38
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.88e3
  • 9.88e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.65
  • 63.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
40.38
  • 40.38
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.99
  • 35.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.87
  • 32.87
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.02e4
  • 2.02e4
  • 2.04e4
  • 2.23e4
  • 2.26e4
32.28
  • 32.28
  • 31.69
  • 25.27
  • 24.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.70
  • 29.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.71
  • 23.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.92
  • 20.92
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.43e4
  • 2.43e4
18.67
  • 18.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria5 species5 genesCompare expression

Orthology information comes from OMA : ENSDARG00000068846.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000068846.

Cross-references

EnsemblENSDARG00000068846 (si:ch73-95l15.3)
ZFINZDB-GENE-131125-23 (si:ch73-95l15.3)
EMBLCT573389
Uniprot/SPTREMBLE7FC80, E7FC80_DANRE

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