Gene: si:ch73-95l15.3 - ENSDARG00000068846 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000068846
Name	si:ch73-95l15.3
Description	si:ch73-95l15.3 [Source:ZFIN;Acc:ZDB-GENE-131125-23]
Organism	Danio rerio (zebrafish)
Orthologs(s)	5 orthologs
Paralog(s)	6 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	792 792	97.35 97.35	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.01e3 2.01e3	93.29 93.29	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	2.11e3 2.11e3	92.95 92.95	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	3.31e3 3.31e3	88.93 88.93	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	3.61e3 3.61e3	87.92 87.92	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	5.52e3 5.52e3 6.40e3	81.52 81.52 78.59	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	6.24e3 6.24e3 1.27e4	79.10 79.10 57.64	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	7.72e3 7.72e3	74.16 74.16	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	7.75e3 7.75e3	74.04 74.04	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	8.25e3 8.25e3	72.38 72.38	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	9.32e3 9.32e3	68.81 68.81	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.88e3 9.88e3	66.92 66.92	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.65 63.65	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.76e4 1.76e4	41.08 41.08	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.78e4 1.78e4	40.38 40.38	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.91e4 1.91e4	35.99 35.99	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	2.00e4 2.00e4	32.87 32.87	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage	2.02e4 2.02e4 2.04e4 2.23e4 2.26e4	32.28 32.28 31.69 25.27 24.23	AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.10e4 2.10e4	29.70 29.70	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.28e4 2.28e4	23.71 23.71	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	2.36e4 2.36e4	20.92 20.92	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	2.43e4 2.43e4	18.67 18.67	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	5 species Drosophila melanogaster (fruit fly) Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	5 genes FBgn0032358 Ppt2 FBgn0143418 GI20683 FBgn0195146 GD23774 FBgn0200504 GJ13278 FBgn0235933 GE18522	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000068846.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	3 genes ENSDARG00000014208 zgc:55413 ENSDARG00000068840 zgc:66024 ENSDARG00000093176 zgc:77118	Compare expression	[+]
Bilateria	5 genes ENSDARG00000010782 zgc:55621 ENSDARG00000014208 zgc:55413 ENSDARG00000068840 zgc:66024 ENSDARG00000093176 zgc:77118 ENSDARG00000104542 ppt2	Compare expression	[+]
Eukaryota	6 genes ENSDARG00000010782 zgc:55621 ENSDARG00000014208 zgc:55413 ENSDARG00000039980 ppt1 ENSDARG00000068840 zgc:66024 ENSDARG00000093176 zgc:77118 ENSDARG00000104542 ppt2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000068846.

Cross-references

Ensembl	ENSDARG00000068846 (si:ch73-95l15.3)
ZFIN	ZDB-GENE-131125-23 (si:ch73-95l15.3)
EMBL	CT573389
Uniprot/SPTREMBL	E7FC80, E7FC80_DANRE