D. rerio Gene: klhl41a - ENSDARG00000068888 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068888
Nameklhl41a
Descriptionkelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
OrganismDanio rerio (zebrafish)
Synonym(s)kbtbd10a, si:dkey-211m23.4
Orthologs(s)13 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.55
  • 87.55
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
4.68e3
  • 4.68e3
  • 1.49e4
84.33
  • 84.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
69.54
  • 69.54
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.28e3
  • 9.28e3
  • 9.82e3
  • 1.09e4
  • 1.43e4
  • 1.65e4
68.94
  • 68.94
  • 67.13
  • 63.56
  • 52.02
  • 44.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
9.40e3
  • 9.40e3
  • 1.42e4
  • 1.79e4
68.54
  • 68.54
  • 52.60
  • 40.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.54
  • 64.54
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.22e4
  • 1.22e4
  • 1.34e4
59.08
  • 59.08
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.24e4
  • 1.24e4
  • 1.47e4
58.36
  • 58.36
  • 50.66
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.37e4
56.79
  • 56.79
  • 54.13
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.72
  • 56.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.67
  • 51.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.95
  • 47.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068888.

Cross-references

EnsemblENSDARG00000068888 (klhl41a)
ZFINZDB-GENE-081105-22 (klhl41a)
EMBLBX321905
Uniprot/SWISSPROTE9QIN8, KL41A_DANRE

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