D. rerio Gene: cyp1b1 - ENSDARG00000068934 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068934
Namecyp1b1
Descriptioncytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cyp1b, zgc:136223
Orthologs(s)14 orthologs
Paralog(s)44 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.38e3
  • 1.38e3
  • 8.96e3
  • 9.96e3
  • 1.10e4
  • 1.28e4
  • 1.37e4
95.40
  • 95.40
  • 70.00
  • 66.67
  • 63.32
  • 57.14
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.91e3
  • 3.91e3
86.91
  • 86.91
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.50e3
  • 5.50e3
  • 8.64e3
81.58
  • 81.58
  • 71.05
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.10e3
  • 7.10e3
  • 1.32e4
  • 1.74e4
76.22
  • 76.22
  • 55.83
  • 41.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.26e4
  • 1.26e4
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
  • 1.36e4
56.22
  • 56.22
  • 54.52
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
  • 1.49e4
  • 1.80e4
56.16
  • 56.16
  • 49.94
  • 39.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.33e4
  • 1.33e4
  • 1.44e4
  • 1.49e4
  • 1.64e4
  • 1.89e4
55.52
  • 55.52
  • 51.79
  • 50.05
  • 45.16
  • 36.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.67
  • 52.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.59
  • 47.59
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 1.69e4
45.76
  • 45.76
  • 43.36
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.63e4
  • 1.63e4
  • 1.79e4
  • 2.03e4
45.35
  • 45.35
  • 40.17
  • 31.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.64e4
  • 1.64e4
  • 1.66e4
  • 1.67e4
  • 1.79e4
  • 1.83e4
  • 1.83e4
45.09
  • 45.09
  • 44.57
  • 44.20
  • 40.18
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.97
  • 36.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.00
  • 31.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.02
  • 30.02
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.15e4
  • 2.15e4
27.95
  • 27.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSDARG00000068934 (cyp1b1)
ZFINZDB-GENE-030902-1 (cyp1b1)
EMBLCT583720
Uniprot/SPTREMBLB8JKD5, B8JKD5_DANRE

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