D. rerio Gene: si:ch211-264e16.1 - ENSDARG00000068947 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068947
Namesi:ch211-264e16.1
Descriptionsi:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
OrganismDanio rerio (zebrafish)
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • UBERON:0000069larval stage
8.08e3
  • 8.08e3
72.96
  • 72.96
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
8.65e3
  • 8.65e3
  • 1.08e4
  • 1.12e4
  • 1.17e4
  • 2.29e4
71.03
  • 71.03
  • 63.75
  • 62.64
  • 60.92
  • 23.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
63.94
  • 63.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.67e4
  • 1.67e4
44.13
  • 44.13
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.89e4
  • 1.89e4
36.68
  • 36.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068947.

Cross-references

EnsemblENSDARG00000068947 (si:ch211-264e16.1)
ZFINZDB-GENE-060503-226 (si:ch211-264e16.1)
Uniprot/SPTREMBLF1Q9N7, F1Q9N7_DANRE

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