D. rerio Gene: si:ch211-261n11.7 - ENSDARG00000068966 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068966
Namesi:ch211-261n11.7
Descriptionsi:ch211-261n11.7 [Source:ZFIN;Acc:ZDB-GENE-081105-144]
OrganismDanio rerio (zebrafish)
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.44
  • 91.44
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.33
  • 91.33
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.63
  • 88.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.88
  • 80.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.88e3
  • 5.88e3
  • 1.13e4
80.31
  • 80.31
  • 62.22
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.42
  • 73.42
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.91
  • 71.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.63
  • 71.63
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.36e3
  • 9.36e3
68.67
  • 68.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.42e3
  • 9.42e3
68.46
  • 68.46
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.87
  • 67.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.57
  • 65.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
59.32
  • 59.32
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 2.20e4
50.23
  • 50.23
  • 26.38
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.65e4
  • 1.65e4
  • 1.67e4
44.76
  • 44.76
  • 44.21
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
  • 1.75e4
  • 1.97e4
  • 2.77e4
44.26
  • 44.26
  • 41.39
  • 34.00
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.75e4
  • 1.75e4
41.54
  • 41.54
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.86e4
  • 1.86e4
  • 1.94e4
37.84
  • 37.84
  • 35.04
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.78
  • 25.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression
Clupeocephala4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000068966.

Cross-references

EnsemblENSDARG00000068966 (si:ch211-261n11.7)
ZFINZDB-GENE-081105-144 (si:ch211-261n11.7)
EMBLCT583651
Uniprot/SPTREMBLE7F9I9, E7F9I9_DANRE

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