D. rerio Gene: bsx - ENSDARG00000068976 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000068976
Namebsx
Descriptionbrain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
OrganismDanio rerio (zebrafish)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.75e3
  • 9.75e3
  • 2.05e4
67.36
  • 67.36
  • 31.29
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.05e4
  • 1.05e4
64.74
  • 64.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.57e4
60.77
  • 60.77
  • 47.31
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.09
  • 56.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.38e4
  • 1.38e4
  • 1.52e4
  • 1.54e4
  • 1.62e4
  • 1.77e4
53.74
  • 53.74
  • 49.04
  • 48.52
  • 45.76
  • 40.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.83
  • 48.83
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.74e4
  • 1.74e4
41.58
  • 41.58
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.93e4
  • 1.93e4
35.48
  • 35.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000068976 (bsx)
ZFINZDB-GENE-040628-4 (bsx)
EMBLAY515251, BC162183, BC162209, BX120005
Uniprot/SPTREMBLQ1LY36, Q1LY36_DANRE
Uniprot/SWISSPROTBSH_DANRE, Q6R3Q6

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