D. rerio Gene: cyp7a1 - ENSDARG00000069018 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069018
Namecyp7a1
Descriptioncytochrome P450, family 7, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1296]
OrganismDanio rerio (zebrafish)
Synonym(s)cyp7a1a, zgc:63920
Orthologs(s)19 orthologs
Paralog(s)44 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
406
  • 406
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.09
  • 96.09
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.41
  • 92.41
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.39e3
  • 2.39e3
  • 2.55e4
91.99
  • 91.99
  • 14.65
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
2.55e3
  • 2.55e3
  • 4.41e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.91e3
91.46
  • 91.46
  • 85.22
  • 78.12
  • 77.77
  • 77.77
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
5.04e3
  • 5.04e3
  • 2.46e4
  • 2.50e4
  • 2.58e4
  • 2.77e4
83.14
  • 83.14
  • 17.70
  • 16.44
  • 13.68
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 8.15e3
75.00
  • 75.00
  • 72.72
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.60e3
  • 7.60e3
74.57
  • 74.57
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.97e3
  • 7.97e3
  • 9.96e3
73.32
  • 73.32
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.77e3
  • 8.77e3
70.63
  • 70.63
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.96e3
  • 8.96e3
  • 9.34e3
69.99
  • 69.99
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.71e3
  • 9.71e3
  • 1.02e4
  • 1.02e4
  • 1.04e4
  • 1.05e4
  • 1.14e4
  • 1.15e4
67.48
  • 67.48
  • 65.89
  • 65.77
  • 65.19
  • 64.98
  • 61.88
  • 61.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
66.65
  • 66.65
  • 65.61
  • 64.69
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
  • 1.09e4
65.89
  • 65.89
  • 63.61
AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.02e4
  • 1.02e4
  • 1.05e4
65.77
  • 65.77
  • 64.69
AEIR
  • AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
64.69
  • 64.69
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
  • 1.16e4
61.10
  • 61.10
  • 61.10
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.60e4
  • 1.60e4
  • 1.91e4
46.59
  • 46.59
  • 35.93
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.42
  • 42.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.64
  • 41.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.37
  • 41.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSDARG00000069018 (cyp7a1)
ZFINZDB-GENE-040426-1296 (cyp7a1)
EMBLCR450692
Uniprot/SPTREMBLF1QU76, F1QU76_DANRE

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