D. rerio Gene: serpinf1 - ENSDARG00000069048 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069048
Nameserpinf1
Descriptionserpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92072
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
668
  • 668
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
701
  • 701
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
842
  • 842
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.00
  • 96.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.77e3
  • 1.77e3
  • 3.27e3
94.08
  • 94.08
  • 89.06
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.87e3
  • 1.87e3
  • 8.30e3
93.76
  • 93.76
  • 72.19
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
3.29e3
  • 3.29e3
  • 3.62e3
  • 7.83e3
  • 9.87e3
  • 1.02e4
89.00
  • 89.00
  • 87.90
  • 73.78
  • 66.95
  • 65.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.14
  • 79.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.05e3
  • 7.05e3
  • 1.06e4
76.38
  • 76.38
  • 64.46
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.91e3
  • 7.91e3
73.52
  • 73.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.45
  • 63.45
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.71
  • 62.71
AEIR
  • AEIR
UBERON:0004741cleithrum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.12e4
  • 1.12e4
  • 1.22e4
62.49
  • 62.49
  • 59.08
AEIR
  • AEIR
  • AEIR
UBERON:0005253head mesenchyme
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
  • 1.19e4
  • 1.20e4
  • 1.20e4
  • 1.20e4
  • 1.20e4
  • 1.28e4
59.99
  • 59.99
  • 59.99
  • 59.98
  • 59.98
  • 59.98
  • 59.98
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.20e4
  • 1.25e4
59.98
  • 59.98
  • 59.98
  • 58.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
59.97
  • 59.97
  • 54.97
  • 54.52
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.97
  • 57.97
AEIR
  • AEIR
UBERON:0008895splanchnocranium
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.31e4
56.24
  • 56.24
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.01
  • 56.01
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.91
  • 49.91
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.70e4
  • 1.70e4
43.21
  • 43.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.71e4
  • 1.71e4
42.80
  • 42.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000069048 (serpinf1)
ZFINZDB-GENE-040912-2 (serpinf1)
EMBLBC081582, BC155160, BX248108
Uniprot/SPTREMBLQ66I20, Q66I20_DANRE

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