Gene: zgc:136924 - ENSDARG00000069058 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000069058
Name	zgc:136924
Description	zgc:136924 [Source:ZFIN;Acc:ZDB-GENE-060312-19]
Organism	Danio rerio (zebrafish)
Orthologs(s)	26 orthologs
Paralog(s)	6 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.92e4 1.92e4	35.81 35.81	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	26 genes ENSG00000168961 LGALS9 ENSG00000170298 LGALS9B ENSG00000171916 LGALS9C ENSMUSG00000001123 Lgals9 ENSPTRG00000008853 LGALS9C ENSPTRG00000008901 LGALS9 ENSGGOG00000000818 ENSGGOG00000009656 ENSGGOG00000021951 ENSGGOG00000022973 LGALS9 ENSMMUG00000017890 LGALS9 ENSRNOG00000012681 Lgals9 ENSBTAG00000006846 ENSSSCG00000017754 ENSECAG00000019932 ENSECAG00000022377 ENSECAG00000024755 ENSOCUG00000025803 ENSCAFG00000018641 ENSFCAG00000009212 ENSCPOG00000022875 ENSMODG00000019227 ENSMODG00000023189 ENSACAG00000008176 ENSXETG00000007928 lgals9 ENSXETG00000030764 lgals9c	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000069058.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	4 genes ENSDARG00000025903 lgals9l1 ENSDARG00000041060 zgc:92326 ENSDARG00000087311 zgc:171951 ENSDARG00000093059 si:ch211-209m20.9	Compare expression	[+]
Eukaryota	6 genes ENSDARG00000025903 lgals9l1 ENSDARG00000037066 LGALS8 (1 to many) ENSDARG00000037613 LGALS8 (1 to many) ENSDARG00000041060 zgc:92326 ENSDARG00000087311 zgc:171951 ENSDARG00000093059 si:ch211-209m20.9	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000069058.

Cross-references

Ensembl	ENSDARG00000069058 (zgc:136924)
ZFIN	ZDB-GENE-060312-19 (zgc:136924)
EMBL	AL928870, BC114308
Uniprot/SPTREMBL	Q29RA0, Q29RA0_DANRE