D. rerio Gene: cyp27a1.2 - ENSDARG00000069186 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069186
Namecyp27a1.2
Descriptioncytochrome P450, family 27, subfamily A, polypeptide 1, gene 2 [Source:ZFIN;Acc:ZDB-GENE-081104-511]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-68f9.10
Orthologs(s)18 orthologs
Paralog(s)40 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.50
  • 83.50
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.90
  • 66.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.39
  • 63.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.15
  • 57.15
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.06
  • 56.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.17
  • 55.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.13
  • 55.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.91
  • 52.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.33
  • 50.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.98
  • 42.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.73e4
  • 1.73e4
  • 1.90e4
42.18
  • 42.18
  • 36.30
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.75e4
  • 1.75e4
  • 2.20e4
  • 2.25e4
  • 2.33e4
41.43
  • 41.43
  • 26.47
  • 24.73
  • 22.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.17
  • 38.17
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.18
  • 35.18
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.01e4
  • 2.01e4
  • 2.22e4
32.65
  • 32.65
  • 25.73
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression
Deuterostomia4 genesCompare expression
Eumetazoa5 genesCompare expression
Metazoa7 genesCompare expression
Eukaryota40 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069186.

Cross-references

EnsemblENSDARG00000069186 (cyp27a1.2)
ZFINZDB-GENE-081104-511 (cyp27a1.2)
EMBLBX001051
Uniprot/SPTREMBLE7F5K9, E7F5K9_DANRE, E9QJ06, E9QJ06_DANRE

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