Gene: si:dkey-242h9.3 - ENSDARG00000069189 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000069189
Name	si:dkey-242h9.3
Description	si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	2.14e3 2.14e3	92.85 92.85	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	5.52e3 5.52e3 1.08e4	81.53 81.53 63.88	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	5.85e3 5.85e3	80.41 80.41	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	6.32e3 6.32e3	78.83 78.83	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.12e3 7.12e3	76.16 76.16	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	8.58e3 8.58e3 1.05e4	71.29 71.29 64.93	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	8.59e3 8.59e3 1.35e4	71.25 71.25 54.85	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.02e3 9.02e3	69.81 69.81	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.88e3 9.88e3	66.93 66.93	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.00e4 1.00e4	66.51 66.51	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec	1.01e4 1.01e4 1.21e4 1.44e4 1.49e4 1.75e4	66.03 66.03 59.58 51.66 50.26 41.43	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.28e4 1.28e4	56.98 56.98	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.31e4 1.31e4	56.26 56.26	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.42 52.42	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.94 50.94	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	49.20 49.20	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.53e4 1.53e4	48.84 48.84	AEIR AEIR
UBERON:0002548	larva	[+] 1 stage UBERON:0000069larval stage	1.61e4 1.61e4	46.21 46.21	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.62e4 1.62e4 1.98e4	45.77 45.77 33.63	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.71e4 1.71e4	42.60 42.60	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	32.04 32.04	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	2.06e4 2.06e4	30.90 30.90	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.08e4 2.08e4	30.37 30.37	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000069189 (si:dkey-242h9.3)
ZFIN	ZDB-GENE-060503-347 (si:dkey-242h9.3)
EMBL	BX908395
Uniprot/SPTREMBL	E9QB75, E9QB75_DANRE, Q1LV54, Q1LV54_DANRE