D. rerio Gene: ebf1b - ENSDARG00000069196 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069196
Nameebf1b
Descriptionearly B-cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
OrganismDanio rerio (zebrafish)
Synonym(s)ebf1, ebf1b, si:ch211-119c24.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
  • 1.80e4
73.60
  • 73.60
  • 39.64
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.51e3
  • 9.51e3
68.16
  • 68.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.92
  • 64.92
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
  • 1.32e4
  • 1.79e4
  • 1.82e4
  • 1.89e4
58.27
  • 58.27
  • 55.66
  • 40.03
  • 39.00
  • 36.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.45
  • 50.45
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.72
  • 48.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.54e4
  • 1.54e4
  • 1.60e4
48.53
  • 48.53
  • 46.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.71e4
  • 1.71e4
  • 1.74e4
42.76
  • 42.76
  • 41.90
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.39
  • 40.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.70
  • 33.70
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.89
  • 26.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000069196 (ebf1b)
ZFINZDB-GENE-090814-2 (ebf1b)
Uniprot/SPTREMBLE7F5K2, E7F5K2_DANRE, F1R6Z5, F1R6Z5_DANRE

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