Gene: si:ch211-196h16.5 - ENSDARG00000069264 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000069264
Name	si:ch211-196h16.5
Description	si:ch211-196h16.5 [Source:ZFIN;Acc:ZDB-GENE-081029-8]
Organism	Danio rerio (zebrafish)
Synonym(s)	f1r795
Paralog(s)	114 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.62e3 3.62e3	87.89 87.89	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	4.04e3 4.04e3	86.47 86.47	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	6.52e3 6.52e3	78.16 78.16	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	7.81e3 7.81e3 1.25e4	73.85 73.85 58.29	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	8.45e3 8.45e3	71.70 71.70	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.04e4 1.04e4	65.13 65.13	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.08e4 1.08e4	63.87 63.87	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.65 63.65	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.44 63.44	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.15e4 1.15e4	61.60 61.60	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.14 59.14	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.31e4 1.31e4 1.75e4	56.02 56.02 41.42	AEIR AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.44e4 1.44e4	51.64 51.64	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.45e4 1.45e4	51.33 51.33	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.46e4 1.46e4	51.13 51.13	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.90 50.90	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.53e4 1.53e4	48.84 48.84	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	1.58e4 1.58e4 1.63e4	47.07 47.07 45.29	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage	1.63e4 1.63e4 1.90e4 1.97e4 2.03e4 2.21e4	45.50 45.50 36.33 34.06 32.13 26.12	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000015Blastula:Dome	1.69e4 1.69e4	43.44 43.44	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.78e4 1.78e4	40.38 40.38	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.88e4 1.88e4 1.88e4	37.12 37.12 36.89	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	114 genes ENSDARG00000043792 si:rp71-7l19.2 ENSDARG00000068161 si:dkey-16p6.4 ENSDARG00000068621 si:ch211-181d7.3 ENSDARG00000068841 si:dkey-29p23.1 ENSDARG00000074653 si:ch211-233m11.1 ENSDARG00000076819 si:dkey-121n8.4 ENSDARG00000077220 si:ch211-208f21.3 ENSDARG00000077673 wu:fb15h11 ENSDARG00000078101 si:dkey-121n8.3 ENSDARG00000078167 si:dkeyp-100h4.1 ENSDARG00000078912 si:ch73-24k9.2 ENSDARG00000079456 si:ch211-149a19.3 ENSDARG00000086130 si:ch211-42i6.2 ENSDARG00000086576 CABZ01069012.1 ENSDARG00000086752 CABZ01069013.1 ENSDARG00000087251 si:ch73-50f9.4 ENSDARG00000087293 si:dkey-84h14.1 ENSDARG00000087597 si:dkey-51d8.3 ENSDARG00000088274 si:ch211-181d7.1 ENSDARG00000089304 si:dkeyp-4f2.1 ENSDARG00000090193 si:ch73-286h23.4 ENSDARG00000090399 CABZ01066439.1 ENSDARG00000090947 si:dkey-29j8.1 ENSDARG00000091013 si:dkey-84h14.2 ENSDARG00000091026 si:ch211-218h8.1 ENSDARG00000091320 zgc:136791 ENSDARG00000091561 si:dkey-156k2.4 ENSDARG00000091847 si:ch211-181d7.1 ENSDARG00000092025 si:dkey-121n8.8 ENSDARG00000093532 si:dkey-230i18.2 ENSDARG00000094067 si:dkey-121n8.7 ENSDARG00000094350 si:ch211-187g4.1 ENSDARG00000094782 si:ch211-196h16.4 ENSDARG00000095013 si:dkey-240n22.3 ENSDARG00000095132 si:dkey-51d8.2 ENSDARG00000095200 si:ch211-197e7.1 ENSDARG00000095528 si:dkey-121n8.5 ENSDARG00000095696 trpm2 ENSDARG00000097700 si:dkey-23k10.2 ENSDARG00000098077 si:dkey-238o14.3 ENSDARG00000098115 si:dkey-178j11.5 ENSDARG00000098177 si:dkey-28i19.3 ENSDARG00000098183 si:ch211-203c5.3 ENSDARG00000098212 CABZ01024848.1 ENSDARG00000098218 si:dkey-261j11.1 ENSDARG00000098279 si:dkey-205i10.1 ENSDARG00000098305 si:ch211-76m11.8 ENSDARG00000098369 si:dkey-165o8.1 ENSDARG00000098390 si:ch211-129p6.2 ENSDARG00000098452 si:dkey-151g22.1 ENSDARG00000098585 si:ch211-237a4.2 ENSDARG00000098610 si:dkey-8o9.2 ENSDARG00000098677 si:dkeyp-120g4.1 ENSDARG00000098879 si:dkey-4j21.2 ENSDARG00000098928 si:ch211-196h24.1 ENSDARG00000099006 CABZ01029938.1 ENSDARG00000099046 si:ch211-227p7.5 ENSDARG00000099318 CABZ01062422.1 ENSDARG00000099381 si:dkey-27n6.1 ENSDARG00000099432 si:ch211-246b8.1 ENSDARG00000099474 CABZ01040931.1 ENSDARG00000099492 CR927215.3 ENSDARG00000099711 si:dkey-92c21.1 ENSDARG00000099899 si:dkeyp-51g9.4 ENSDARG00000099963 si:ch211-223k15.1 ENSDARG00000100099 si:ch211-263l8.1 ENSDARG00000100110 si:ch211-79g12.2 ENSDARG00000100219 si:dkey-264f17.1 ENSDARG00000100341 si:ch211-196h24.2 ENSDARG00000100348 si:ch211-232d10.2 ENSDARG00000100460 si:dkey-217g21.3 ENSDARG00000100865 si:dkey-269o24.1 ENSDARG00000101123 CABZ01009512.1 ENSDARG00000101272 si:dkey-29j8.1 ENSDARG00000101274 si:ch211-232h22.1 ENSDARG00000101374 si:dkey-11n14.1 ENSDARG00000101389 zgc:174180 ENSDARG00000101450 si:ch211-215p11.3 ENSDARG00000101653 zgc:110171 ENSDARG00000101751 si:ch211-133h13.1 ENSDARG00000101948 si:ch211-39d8.1 ENSDARG00000102215 si:ch211-227e10.6 ENSDARG00000102225 si:ch211-205a14.7 ENSDARG00000102468 si:dkey-71l4.5 ENSDARG00000102495 CT573234.4 ENSDARG00000102595 si:dkey-250k10.1 ENSDARG00000102616 si:dkey-3h2.3 ENSDARG00000102638 si:rp71-7l19.2 ENSDARG00000102713 si:ch211-205a14.1 ENSDARG00000102737 CABZ01060490.2 ENSDARG00000102927 si:dkey-261o4.6 ENSDARG00000103003 si:dkey-211i20.2 ENSDARG00000103081 si:ch211-250k18.5 ENSDARG00000103265 si:ch211-223g7.2 ENSDARG00000103281 si:dkey-56m15.9 ENSDARG00000103584 BX927374.1 ENSDARG00000103952 CABZ01054392.2 ENSDARG00000103992 si:dkey-146m20.14 ENSDARG00000104008 si:ch211-232d10.3 ENSDARG00000104088 si:dkey-14o6.2 ENSDARG00000104166 si:ch211-232d10.1 ENSDARG00000104232 si:dkey-165b20.1 ENSDARG00000104266 si:dkey-29m1.2 ENSDARG00000104328 si:ch211-276i6.1 ENSDARG00000104334 si:ch211-59d8.2 ENSDARG00000104341 si:dkey-238o14.1 ENSDARG00000104424 CABZ01009512.3 ENSDARG00000104446 si:ch211-218k8.1 ENSDARG00000104476 si:dkey-41c6.3 ENSDARG00000104804 si:ch211-238e22.8 ENSDARG00000104890 si:ch211-76m11.3 ENSDARG00000104893 si:ch211-207e19.2 ENSDARG00000104916 zgc:174178 ENSDARG00000105161 si:dkey-238g7.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000069264.

Cross-references

Ensembl	ENSDARG00000069264 (si:ch211-196h16.5)
ZFIN	ZDB-GENE-081029-8 (si:ch211-196h16.5)
EMBL	AL929150
Uniprot/SPTREMBL	E7F3U2, E7F3U2_DANRE