D. rerio Gene: efr3bb - ENSDARG00000069318 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069318
Nameefr3bb
DescriptionEFR3 homolog Bb (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-293]
OrganismDanio rerio (zebrafish)
Synonym(s)efr3b, si:ch211-203k16.1, si:ch211-215m21.18, si:dkeyp-70e6.6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.82e3
  • 3.82e3
87.19677
  • 87.19677
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.18e3
  • 4.18e3
85.99632
  • 85.99632
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.22e3
  • 4.22e3
  • 5.52e3
85.86210
  • 85.86210
  • 81.52895
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.45e3
  • 4.45e3
85.09192
  • 85.09192
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.36e3
  • 6.36e3
  • 1.20e4
78.69213
  • 78.69213
  • 59.93808
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.83602
  • 69.83602
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.61658
  • 65.61658
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.32632
  • 64.32632
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.33e4
59.98644
  • 59.98644
  • 55.58986
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.83575
  • 58.83575
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.74828
  • 58.74828
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63778
  • 58.63778
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.85296
  • 56.85296
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.90071
  • 54.90071
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.35e4
  • 1.35e4
  • 1.36e4
  • 1.43e4
  • 1.47e4
  • 1.75e4
54.87192
  • 54.87192
  • 54.53739
  • 52.12805
  • 50.89174
  • 41.49724
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.21759
  • 54.21759
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.86934
  • 53.86934
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.46589
  • 49.46589
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.05468
  • 47.05468
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.34012
  • 46.34012
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.69199
  • 45.69199
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.64e4
  • 1.64e4
  • 1.77e4
44.92298
  • 44.92298
  • 40.65325
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.75535
  • 42.75535
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.71255
  • 40.71255
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL845420, AL928995
EnsemblENSDARG00000069318 (efr3bb)
Uniprot/SWISSPROTEFR3B_DANRE, Q5SPP5
ZFINZDB-GENE-041014-293 (efr3bb)

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