D. rerio Gene: CLEC17A (1 to many) - ENSDARG00000069323 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069323
NameCLEC17A (1 to many)
Descriptionsi:ch73-122g19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-239]
OrganismDanio rerio (zebrafish)
Synonym(s)flj45910
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.28e3
  • 6.28e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.31
  • 50.31
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.65
  • 41.65
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.38
  • 40.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.78
  • 37.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.41
  • 36.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.95
  • 33.95
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
  • 2.15e4
32.68
  • 32.68
  • 28.11
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.14e4
  • 2.14e4
  • 2.33e4
28.42
  • 28.42
  • 22.04
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.73
  • 21.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.55e4
  • 2.55e4
14.59
  • 14.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069323.

Cross-references

EnsemblENSDARG00000069323 (CLEC17A (1 to many))
HGNCHGNC:34520 (CLEC17A (1 to many))
ZFINZDB-GENE-110411-239 (si:ch73-122g19.1)
EMBLCT827808
Uniprot/SPTREMBLE7F2R6, E7F2R6_DANRE

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