D. rerio Gene: AGFG2 - ENSDARG00000069334 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069334
NameAGFG2
Descriptionzgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
OrganismDanio rerio (zebrafish)
Synonym(s)hrbl, rabr
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.42e3
  • 3.42e3
  • 9.33e3
  • 9.51e3
  • 1.38e4
88.55
  • 88.55
  • 68.74
  • 68.17
  • 53.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.34
  • 85.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.80e3
  • 4.80e3
  • 1.62e4
83.92
  • 83.92
  • 45.91
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.71
  • 83.71
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
  • 5.01e3
83.36
  • 83.36
  • 83.23
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.26e3
  • 5.26e3
  • 7.50e3
82.38
  • 82.38
  • 74.90
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.98e3
  • 5.98e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.34e3
  • 9.67e3
  • 9.67e3
  • 1.23e4
  • 1.23e4
79.99
  • 79.99
  • 69.99
  • 69.99
  • 69.99
  • 68.74
  • 67.63
  • 67.63
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.52e3
  • 6.52e3
  • 7.34e3
  • 8.12e3
  • 8.45e3
  • 8.92e3
  • 9.97e3
  • 1.13e4
  • 1.15e4
  • 1.19e4
  • 1.55e4
78.18
  • 78.18
  • 75.43
  • 72.82
  • 71.71
  • 70.15
  • 66.61
  • 62.27
  • 61.50
  • 60.29
  • 48.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.01e3
  • 7.01e3
  • 1.14e4
  • 1.28e4
  • 1.35e4
  • 1.45e4
76.52
  • 76.52
  • 61.83
  • 57.18
  • 54.68
  • 51.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.64
  • 73.64
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.12
  • 72.12
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
70.26
  • 70.26
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.03e3
  • 9.03e3
  • 1.12e4
  • 1.23e4
69.78
  • 69.78
  • 62.38
  • 58.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
68.99
  • 68.99
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
9.34e3
  • 9.34e3
  • 9.56e3
  • 9.67e3
  • 1.05e4
68.74
  • 68.74
  • 67.98
  • 67.63
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
9.68e3
  • 9.68e3
  • 1.05e4
  • 1.19e4
  • 1.22e4
  • 1.26e4
  • 1.31e4
  • 1.31e4
  • 1.33e4
  • 1.34e4
  • 1.34e4
  • 1.36e4
  • 1.37e4
  • 1.41e4
67.58
  • 67.58
  • 64.76
  • 60.20
  • 59.00
  • 57.79
  • 56.25
  • 56.03
  • 55.37
  • 55.12
  • 55.08
  • 54.35
  • 54.25
  • 52.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
59.66
  • 59.66
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e4
  • 1.22e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
  • 1.25e4
58.80
  • 58.80
  • 58.31
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.25e4
  • 1.25e4
58.07
  • 58.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.26e4
  • 1.26e4
  • 1.31e4
  • 1.61e4
57.88
  • 57.88
  • 56.05
  • 46.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
55.25
  • 55.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.64
  • 47.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.60e4
  • 1.60e4
46.41
  • 46.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069334.

Cross-references

EnsemblENSDARG00000069334 (AGFG2)
HGNCHGNC:5177 (AGFG2)
ZFINZDB-GENE-050913-119 (zgc:114045)
EMBLBX322601
Uniprot/SPTREMBLF1QX54, F1QX54_DANRE, F1RDK8, F1RDK8_DANRE

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