D. rerio Gene: ppp3r1b - ENSDARG00000069360 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069360
Nameppp3r1b
Descriptionprotein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
OrganismDanio rerio (zebrafish)
Synonym(s)ppp3r, zgc:92169
Orthologs(s)24 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
621
  • 621
  • 1.53e3
  • 1.54e3
  • 3.30e3
97.92
  • 97.92
  • 94.87
  • 94.84
  • 88.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.06e3
  • 1.06e3
  • 3.22e3
96.44
  • 96.44
  • 89.20
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
  • 1.96e3
95.75
  • 95.75
  • 93.45
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
  • 1.97e3
  • 2.36e3
  • 2.37e3
  • 2.53e3
  • 2.72e3
  • 2.92e3
  • 3.03e3
  • 3.38e3
  • 4.29e3
  • 4.50e3
  • 5.20e3
  • 6.83e3
  • 1.00e4
  • 1.43e4
  • 1.44e4
  • 1.50e4
95.58
  • 95.58
  • 93.42
  • 92.10
  • 92.07
  • 91.54
  • 90.91
  • 90.23
  • 89.85
  • 88.67
  • 85.65
  • 84.94
  • 82.58
  • 77.14
  • 66.52
  • 51.99
  • 51.82
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.41e3
  • 1.41e3
  • 1.55e3
  • 1.93e3
  • 1.98e3
  • 2.12e3
  • 2.15e3
  • 4.06e3
  • 4.31e3
  • 4.70e3
  • 4.89e3
95.27
  • 95.27
  • 94.81
  • 93.55
  • 93.38
  • 92.89
  • 92.81
  • 86.41
  • 85.58
  • 84.27
  • 83.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.85e3
  • 1.85e3
  • 2.33e3
  • 2.77e3
93.82
  • 93.82
  • 92.19
  • 90.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.89e3
  • 1.89e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.99e3
  • 1.99e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.37e3
  • 2.37e3
  • 1.47e4
92.05
  • 92.05
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.52e3
  • 2.52e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
  • 3.25e3
90.92
  • 90.92
  • 89.11
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.72e3
  • 2.72e3
90.88
  • 90.88
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.82
  • 90.82
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
  • 4.24e3
90.18
  • 90.18
  • 85.80
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.12
  • 90.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.55
  • 89.55
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.21e3
  • 3.21e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
4.04e3
  • 4.04e3
  • 4.23e3
  • 4.93e3
  • 5.14e3
  • 5.67e3
  • 6.67e3
86.47
  • 86.47
  • 85.83
  • 83.49
  • 82.80
  • 81.00
  • 77.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
4.30e3
  • 4.30e3
  • 1.17e4
85.61
  • 85.61
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.89
  • 84.89
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.49
  • 84.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.77e3
  • 5.77e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
6.42e3
  • 6.42e3
  • 7.89e3
  • 8.88e3
  • 1.05e4
  • 1.06e4
78.51
  • 78.51
  • 73.57
  • 70.26
  • 64.71
  • 64.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.11e4
  • 1.11e4
62.84
  • 62.84
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.17e4
  • 1.17e4
  • 1.24e4
  • 1.25e4
60.70
  • 60.70
  • 58.33
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.22e4
  • 1.22e4
  • 1.40e4
59.08
  • 59.08
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.34e4
56.65
  • 56.65
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000035Larval:Protruding-mouth
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.33e4
56.22
  • 56.22
  • 55.53
AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.36e4
  • 1.41e4
56.22
  • 56.22
  • 54.53
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.42e4
55.16
  • 55.16
  • 52.57
AEIR
  • AEIR
  • AEIR
UBERON:0000935anterior commissure
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003936postoptic commissure
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi12 species12 genesCompare expression
Bilateria19 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000069360.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Opisthokonta3 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069360.

Cross-references

EnsemblENSDARG00000069360 (ppp3r1b)
ZFINZDB-GENE-040912-18 (ppp3r1b)
EMBLBC081617, CU929104
Uniprot/SPTREMBLQ66HZ0, Q66HZ0_DANRE

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