D. rerio Gene: plscr3b - ENSDARG00000069432 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069432
Nameplscr3b
Descriptionphospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77051
Orthologs(s)33 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
307
  • 307
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
365
  • 365
  • 502
  • 901
  • 936
  • 1.21e3
98.78
  • 98.78
  • 98.32
  • 96.99
  • 96.87
  • 95.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
537
  • 537
  • 987
98.21
  • 98.21
  • 96.70
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
955
  • 955
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000026Segmentation:14-19 somites
1.03e3
  • 1.03e3
  • 1.17e3
  • 1.20e3
  • 1.33e3
  • 1.36e3
  • 1.61e3
  • 1.78e3
  • 1.83e3
  • 1.85e3
  • 1.89e3
  • 2.02e3
  • 2.16e3
  • 2.39e3
  • 2.49e3
  • 2.57e3
96.57
  • 96.57
  • 96.09
  • 96.00
  • 95.56
  • 95.44
  • 94.60
  • 94.05
  • 93.88
  • 93.81
  • 93.67
  • 93.22
  • 92.78
  • 92.01
  • 91.67
  • 91.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
1.05e3
  • 1.05e3
  • 1.07e3
  • 1.30e3
  • 1.41e3
  • 1.67e3
  • 1.86e3
  • 2.06e3
  • 2.09e3
  • 2.18e3
  • 2.35e3
96.49
  • 96.49
  • 96.42
  • 95.64
  • 95.30
  • 94.41
  • 93.78
  • 93.11
  • 93.00
  • 92.69
  • 92.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
1.16e3
  • 1.16e3
  • 1.27e3
  • 1.57e3
  • 1.59e3
  • 2.21e3
  • 2.60e3
96.11
  • 96.11
  • 95.76
  • 94.76
  • 94.68
  • 92.60
  • 91.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
  • 1.62e3
95.94
  • 95.94
  • 94.57
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.37e3
  • 1.37e3
95.41
  • 95.41
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.40e3
  • 1.40e3
  • 7.47e3
  • 9.82e3
  • 1.22e4
95.33
  • 95.33
  • 74.99
  • 67.13
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.48e3
  • 1.48e3
  • 1.59e3
  • 1.93e3
95.05
  • 95.05
  • 94.69
  • 93.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.50e3
  • 1.50e3
94.98
  • 94.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.61e3
  • 1.61e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.21
  • 94.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.37e3
  • 2.37e3
92.07
  • 92.07
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.45e3
  • 2.45e3
91.79
  • 91.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.00e3
  • 3.00e3
89.95
  • 89.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.13e3
  • 3.13e3
  • 3.53e3
89.53
  • 89.53
  • 88.20
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.24e3
  • 3.24e3
89.16
  • 89.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.11
  • 89.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.26
  • 88.26
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.21e3
  • 4.21e3
85.89
  • 85.89
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
  • 6.69e3
  • 1.05e4
81.95
  • 81.95
  • 77.60
  • 64.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.24
  • 76.24
AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000027Segmentation:20-25 somites
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.28e4
  • 1.32e4
65.61
  • 65.61
  • 57.12
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005068neural rod
  • ZFS:0000026Segmentation:14-19 somites
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.41e4
64.28
  • 64.28
  • 52.92
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
  • 1.18e4
64.27
  • 64.27
  • 60.50
AEIR
  • AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:00072322 cell stage
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000026Segmentation:14-19 somites
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
1.18e4
  • 1.18e4
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000027Segmentation:20-25 somites
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000027Segmentation:20-25 somites
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species23 genesCompare expression
Bilateria22 species33 genesCompare expression

Orthology information comes from OMA : ENSDARG00000069432.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069432.

Cross-references

EnsemblENSDARG00000069432 (plscr3b)
ZFINZDB-GENE-040426-2517 (plscr3b)
EMBLBC066765, CR848032
Uniprot/SPTREMBLQ6NY24, Q6NY24_DANRE

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