Gene: cfap58 - ENSDARG00000069435 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000069435
Name	cfap58
Description	cilia and flagella associated protein 58 [Source:ZFIN;Acc:ZDB-GENE-060929-128]
Organism	Danio rerio (zebrafish)
Synonym(s)	ccdc147, e7ezy6, zgc:153620
Orthologs(s)	24 orthologs
Paralog(s)	50 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.02e3 1.02e3	96.60 96.60	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.31e4 1.31e4	56.08 56.08	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.00 54.00	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	48.97 48.97	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.53e4 1.53e4	48.65 48.65	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.55e4 1.55e4	48.06 48.06	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	46.08 46.08	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.63e4 1.63e4	45.44 45.44	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.72e4 1.72e4	42.32 42.32	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	41.92 41.92	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5	1.79e4 1.79e4 1.82e4 1.94e4 2.09e4 2.21e4	40.10 40.10 38.99 34.97 30.18 25.86	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.83e4 1.83e4	38.86 38.86	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.83e4 1.83e4	38.57 38.57	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.87e4 1.87e4 2.22e4	37.22 37.22 25.69	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.96e4 1.96e4 2.17e4	34.36 34.36 27.31	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000120051 CFAP58 ENSMUSG00000046585 Cfap58 ENSPTRG00000002928 CFAP58 ENSGGOG00000010254 CFAP58 ENSMMUG00000015339 CFAP58 ENSRNOG00000049596 Cfap58 ENSBTAG00000007243 CFAP58 ENSSSCG00000010614 ENSECAG00000019301 CFAP58 ENSOCUG00000008719 CFAP58 ENSCAFG00000010608 CFAP58 ENSFCAG00000006024 CFAP58 ENSCPOG00000000492 CFAP58 ENSEEUG00000007682 CFAP58 ENSOANG00000001608 ENSGALG00000008417 CFAP58 ENSACAG00000005225 CFAP58 ENSXETG00000013925 cfap58	Compare expression	[+]
Bilateria	23 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila virilis Drosophila yakuba	24 genes ENSG00000120051 CFAP58 ENSMUSG00000046585 Cfap58 FBgn0039490 CG5882 FBgn0046323 Ory ENSPTRG00000002928 CFAP58 ENSGGOG00000010254 CFAP58 ENSMMUG00000015339 CFAP58 ENSRNOG00000049596 Cfap58 ENSBTAG00000007243 CFAP58 ENSSSCG00000010614 ENSECAG00000019301 CFAP58 ENSOCUG00000008719 CFAP58 ENSCAFG00000010608 CFAP58 ENSFCAG00000006024 CFAP58 ENSCPOG00000000492 CFAP58 ENSEEUG00000007682 CFAP58 ENSOANG00000001608 ENSGALG00000008417 CFAP58 ENSACAG00000005225 CFAP58 ENSXETG00000013925 cfap58 FBgn0100273 GF23279 FBgn0146026 GI23299 FBgn0211238 GJ24154 FBgn0240877 GE23719	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000069435.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	50 genes ENSDARG00000000103 myh10 ENSDARG00000001014 myh9b ENSDARG00000002295 si:dkey-21p1.3 ENSDARG00000007751 lmnl3 ENSDARG00000009782 myh11a ENSDARG00000012073 kif15 ENSDARG00000013006 pibf1 ENSDARG00000013415 lmna ENSDARG00000017105 vaspb ENSDARG00000019231 spna2 ENSDARG00000026489 khsrp ENSDARG00000026569 pimr196 ENSDARG00000029248 fubp1 ENSDARG00000035427 surf6 ENSDARG00000035650 evla ENSDARG00000038917 rad50 ENSDARG00000039279 golga5 ENSDARG00000042141 myo6b ENSDARG00000044016 myo6a ENSDARG00000044299 lmnb1 ENSDARG00000051896 fbn2a ENSDARG00000060627 HIP1R (1 to many) ENSDARG00000060751 taok3a ENSDARG00000062532 fam21c ENSDARG00000062727 cep290 ENSDARG00000062972 hip1 ENSDARG00000063054 shank3b ENSDARG00000063295 myh9a ENSDARG00000067859 scospondin ENSDARG00000069603 taok1a ENSDARG00000073732 myh14 ENSDARG00000074899 taok2a ENSDARG00000075090 CU467646.1 ENSDARG00000076476 zgc:173770 ENSDARG00000077928 ccdc173 ENSDARG00000079751 megf8 ENSDARG00000086896 FUBP3 ENSDARG00000094343 ZNF197 (1 to many) ENSDARG00000098237 fbn2b ENSDARG00000098304 TAOK1 (1 to many) ENSDARG00000098777 AIM1L ENSDARG00000099076 CU467646.3 ENSDARG00000099294 FKBP15 (1 to many) ENSDARG00000099690 vaspa ENSDARG00000099720 evlb ENSDARG00000100584 ccdc40 ENSDARG00000100620 taok2b ENSDARG00000100972 myh11b ENSDARG00000101624 lmnb2 ENSDARG00000102458 hip1rb	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000069435.

Cross-references

Ensembl	ENSDARG00000069435 (cfap58)
ZFIN	ZDB-GENE-060929-128 (cfap58)
EMBL	CABZ01005086, CR381623, CU407322
Uniprot/SPTREMBL	B8JHX6, B8JHX6_DANRE, F1QGB9, F1QGB9_DANRE