D. rerio Gene: tmem179b - ENSDARG00000069495 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069495
Nametmem179b
Descriptiontransmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-17e16.16
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.77e4
60.83
  • 60.83
  • 40.81
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.06
  • 50.06
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.57e4
  • 1.57e4
47.35
  • 47.35
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
  • 1.75e4
  • 2.15e4
  • 2.77e4
47.14
  • 47.14
  • 41.24
  • 27.86
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.58e4
  • 1.58e4
47.10
  • 47.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.59e4
  • 1.59e4
46.77
  • 46.77
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
  • 2.00e4
44.80
  • 44.80
  • 33.18
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.15
  • 43.15
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
  • 1.91e4
43.08
  • 43.08
  • 36.05
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.44
  • 40.44
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.68
  • 38.68
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.05
  • 38.05
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.50
  • 31.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000069495.

Cross-references

EnsemblENSDARG00000069495 (tmem179b)
ZFINZDB-GENE-091204-145 (tmem179b)
EMBLCR388166
Uniprot/SPTREMBLE7F498, E7F498_DANRE

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