D. rerio Gene: CNDP1 - ENSDARG00000069583 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069583
NameCNDP1
Descriptionzgc:114181 [Source:ZFIN;Acc:ZDB-GENE-050913-105]
OrganismDanio rerio (zebrafish)
Synonym(s)cn1, cpgl2, hst2308, mgc10825, wu:cegs2551
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
844
  • 844
  • 1.43e3
97.18
  • 97.18
  • 95.21
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
860
  • 860
  • 904
  • 1.06e3
  • 1.15e3
  • 1.27e3
  • 1.28e3
  • 1.28e3
  • 1.62e3
  • 2.19e3
  • 2.60e3
97.12
  • 97.12
  • 96.98
  • 96.46
  • 96.16
  • 95.74
  • 95.73
  • 95.71
  • 94.59
  • 92.66
  • 91.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.40e3
  • 1.40e3
  • 1.94e3
  • 3.38e3
95.31
  • 95.31
  • 93.50
  • 88.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
2.40e3
  • 2.40e3
  • 2.84e3
  • 3.40e3
  • 3.57e3
  • 4.32e3
  • 4.39e3
  • 4.48e3
  • 4.87e3
  • 6.08e3
  • 9.20e3
  • 9.30e3
  • 1.07e4
  • 1.23e4
91.96
  • 91.96
  • 90.49
  • 88.60
  • 88.05
  • 85.55
  • 85.31
  • 84.99
  • 83.70
  • 79.65
  • 69.20
  • 68.85
  • 64.21
  • 58.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
  • 5.58e3
86.16
  • 86.16
  • 81.33
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
4.40e3
  • 4.40e3
  • 9.06e3
  • 9.62e3
  • 1.21e4
  • 1.39e4
  • 1.70e4
85.27
  • 85.27
  • 69.66
  • 67.78
  • 59.47
  • 53.56
  • 43.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.83e3
  • 4.83e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0002422fourth ventricle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
4.98e3
  • 4.98e3
  • 4.98e3
83.34
  • 83.34
  • 83.34
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.05e3
  • 5.05e3
  • 6.10e3
  • 1.03e4
83.09
  • 83.09
  • 79.57
  • 65.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000027Segmentation:20-25 somites
6.54e3
  • 6.54e3
  • 6.97e3
  • 8.79e3
  • 9.96e3
  • 1.07e4
  • 1.14e4
78.12
  • 78.12
  • 76.66
  • 70.57
  • 66.65
  • 64.27
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002286third ventricle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
  • 1.55e4
70.12
  • 70.12
  • 48.08
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.61
  • 57.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.92
  • 50.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.73
  • 46.73
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.28
  • 45.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.13
  • 39.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.68
  • 36.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.48
  • 32.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.42
  • 30.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.14
  • 30.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000069583.

Cross-references

EnsemblENSDARG00000069583 (CNDP1)
HGNCHGNC:20675 (CNDP1)
ZFINZDB-GENE-050913-105 (zgc:114181)
EMBLCU861891
Uniprot/SPTREMBLF1Q8B1, F1Q8B1_DANRE, X1WHB9, X1WHB9_DANRE

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