D. rerio Gene: chid1 - ENSDARG00000069673 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069673
Namechid1
Descriptionchitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
OrganismDanio rerio (zebrafish)
Synonym(s)fb02e07, wu:fb02e07, zgc:66396
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.06
  • 89.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.04
  • 89.04
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
3.40e3
  • 3.40e3
  • 6.07e3
  • 8.49e3
  • 9.19e3
88.61
  • 88.61
  • 79.66
  • 71.58
  • 69.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
3.48e3
  • 3.48e3
  • 9.72e3
  • 1.45e4
88.34
  • 88.34
  • 67.46
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.13
  • 88.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.21
  • 86.21
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.82e3
  • 4.82e3
83.86
  • 83.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
  • 5.97e3
  • 6.22e3
  • 6.97e3
  • 9.75e3
  • 1.01e4
  • 1.05e4
  • 1.11e4
  • 1.19e4
  • 1.19e4
  • 1.22e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.28e4
  • 1.29e4
  • 1.30e4
  • 1.32e4
  • 1.33e4
  • 1.50e4
83.33
  • 83.33
  • 80.00
  • 79.16
  • 76.66
  • 67.37
  • 66.34
  • 64.69
  • 62.72
  • 60.31
  • 60.01
  • 59.22
  • 58.12
  • 58.11
  • 58.10
  • 57.23
  • 56.90
  • 56.43
  • 55.83
  • 55.46
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
  • 7.32e3
83.31
  • 83.31
  • 75.49
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.83
  • 82.83
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
5.29e3
  • 5.29e3
  • 6.31e3
  • 7.27e3
  • 9.64e3
  • 1.03e4
  • 1.13e4
  • 1.13e4
  • 1.24e4
  • 1.28e4
  • 1.36e4
82.30
  • 82.30
  • 78.88
  • 75.67
  • 67.73
  • 65.53
  • 62.23
  • 62.13
  • 58.32
  • 57.29
  • 54.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.45
  • 80.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.91e3
  • 5.91e3
  • 9.39e3
  • 1.14e4
80.22
  • 80.22
  • 68.55
  • 61.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.69e3
  • 7.69e3
  • 7.77e3
74.26
  • 74.26
  • 73.99
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.75e3
  • 7.75e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
  • 8.24e3
73.79
  • 73.79
  • 72.40
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.89e3
  • 7.89e3
73.58
  • 73.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.46e3
  • 8.46e3
  • 1.50e4
71.69
  • 71.69
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
8.50e3
  • 8.50e3
  • 1.10e4
  • 1.10e4
  • 1.12e4
  • 1.26e4
71.53
  • 71.53
  • 63.26
  • 63.02
  • 62.61
  • 57.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.04e4
  • 1.04e4
  • 1.09e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.26e4
65.02
  • 65.02
  • 63.63
  • 59.31
  • 59.04
  • 59.00
  • 57.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.13e4
  • 1.13e4
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.23e4
  • 1.23e4
58.73
  • 58.73
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
55.02
  • 55.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000069673.

Cross-references

EnsemblENSDARG00000069673 (chid1)
ZFINZDB-GENE-030131-9169 (chid1)
EMBLCU138509
Uniprot/SPTREMBLF1RB70, F1RB70_DANRE

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