D. rerio Gene: si:ch211-198k9.6 - ENSDARG00000069804 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069804
Namesi:ch211-198k9.6
Descriptionsi:ch211-198k9.6 [Source:ZFIN;Acc:ZDB-GENE-090312-4]
OrganismDanio rerio (zebrafish)
Paralog(s)23 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
  • 2.18e4
69.66
  • 69.66
  • 27.13
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.53
  • 67.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.37
  • 60.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.24e4
  • 1.24e4
58.44
  • 58.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.79e4
  • 1.79e4
  • 1.94e4
  • 1.99e4
  • 2.02e4
  • 2.09e4
40.22
  • 40.22
  • 35.06
  • 33.25
  • 32.46
  • 30.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.81e4
  • 1.81e4
  • 1.92e4
39.53
  • 39.53
  • 35.86
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.01
  • 37.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.02e4
  • 2.02e4
  • 2.22e4
32.35
  • 32.35
  • 25.79
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.13
  • 32.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.43
  • 31.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.81
  • 25.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.12
  • 22.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala22 genesCompare expression
Chordata23 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069804.

Cross-references

EnsemblENSDARG00000069804 (si:ch211-198k9.6)
ZFINZDB-GENE-090312-4 (si:ch211-198k9.6)
EMBLBX908780
Uniprot/SPTREMBLF1QGR2, F1QGR2_DANRE

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