Gene: si:ch211-198k9.6 - ENSDARG00000069804 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000069804
Name	si:ch211-198k9.6
Description	si:ch211-198k9.6 [Source:ZFIN;Acc:ZDB-GENE-090312-4]
Organism	Danio rerio (zebrafish)
Paralog(s)	23 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	9.06e3 9.06e3 2.18e4	69.66 69.66 27.13	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.70e3 9.70e3	67.53 67.53	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.18e4 1.18e4	60.37 60.37	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.24e4 1.24e4	58.44 58.44	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec	1.79e4 1.79e4 1.94e4 1.99e4 2.02e4 2.09e4	40.22 40.22 35.06 33.25 32.46 30.06	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.81e4 1.81e4 1.92e4	39.53 39.53 35.86	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.88e4 1.88e4	37.01 37.01	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	2.02e4 2.02e4 2.22e4	32.35 32.35 25.79	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	32.13 32.13	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	2.05e4 2.05e4	31.43 31.43	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.22e4 2.22e4	25.81 25.81	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.33e4 2.33e4	22.12 22.12	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	22 genes ENSDARG00000077344 si:dkey-27d5.14 ENSDARG00000077475 zgc:174353 ENSDARG00000086077 si:ch211-156l18.4 ENSDARG00000092670 BX005399.1 ENSDARG00000092675 BX005399.2 ENSDARG00000093221 si:dkey-23f9.11 ENSDARG00000093481 zgc:77614 ENSDARG00000094032 BX005399.3 ENSDARG00000094152 si:dkey-27d5.5 ENSDARG00000094717 BX005399.4 ENSDARG00000094765 BX247865.3 ENSDARG00000094940 BX247865.4 ENSDARG00000094987 si:dkey-27d5.4 ENSDARG00000095028 BX005399.5 ENSDARG00000095285 BX005399.6 ENSDARG00000099398 zgc:174461 ENSDARG00000099620 CABZ01052747.1 ENSDARG00000100009 zgc:91850 ENSDARG00000101243 CABZ01049825.1 ENSDARG00000103596 BX247865.5 ENSDARG00000103724 CABZ01022569.2 ENSDARG00000105222 BX005399.8	Compare expression	[+]
Chordata	23 genes ENSDARG00000077344 si:dkey-27d5.14 ENSDARG00000077475 zgc:174353 ENSDARG00000086077 si:ch211-156l18.4 ENSDARG00000092670 BX005399.1 ENSDARG00000092675 BX005399.2 ENSDARG00000093221 si:dkey-23f9.11 ENSDARG00000093481 zgc:77614 ENSDARG00000094032 BX005399.3 ENSDARG00000094152 si:dkey-27d5.5 ENSDARG00000094717 BX005399.4 ENSDARG00000094765 BX247865.3 ENSDARG00000094940 BX247865.4 ENSDARG00000094987 si:dkey-27d5.4 ENSDARG00000095028 BX005399.5 ENSDARG00000095285 BX005399.6 ENSDARG00000099398 zgc:174461 ENSDARG00000099620 CABZ01052747.1 ENSDARG00000100009 zgc:91850 ENSDARG00000101243 CABZ01049825.1 ENSDARG00000101486 CABZ01074459.1 ENSDARG00000103596 BX247865.5 ENSDARG00000103724 CABZ01022569.2 ENSDARG00000105222 BX005399.8	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000069804.

Cross-references

Ensembl	ENSDARG00000069804 (si:ch211-198k9.6)
ZFIN	ZDB-GENE-090312-4 (si:ch211-198k9.6)
EMBL	BX908780
Uniprot/SPTREMBL	F1QGR2, F1QGR2_DANRE