D. rerio Gene: zdhhc18a - ENSDARG00000069807 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069807
Namezdhhc18a
Descriptionzinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
OrganismDanio rerio (zebrafish)
Synonym(s)zdhhc18, zgc:153461
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
783
  • 783
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.10e3
  • 1.10e3
  • 6.04e3
  • 6.39e3
  • 6.87e3
  • 7.30e3
  • 7.47e3
  • 7.68e3
  • 8.37e3
  • 8.46e3
  • 8.87e3
  • 8.96e3
  • 9.33e3
  • 9.48e3
  • 9.67e3
  • 1.43e4
  • 1.47e4
  • 1.48e4
96.34
  • 96.34
  • 79.79
  • 78.60
  • 76.99
  • 75.57
  • 74.99
  • 74.29
  • 71.99
  • 71.68
  • 70.31
  • 69.98
  • 68.77
  • 68.26
  • 67.63
  • 51.99
  • 50.90
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.11e3
  • 1.11e3
  • 1.17e3
  • 1.26e3
  • 2.88e3
  • 3.82e3
96.29
  • 96.29
  • 96.08
  • 95.78
  • 90.36
  • 87.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.62e3
  • 1.62e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.68e3
  • 3.68e3
  • 3.98e3
87.68
  • 87.68
  • 86.68
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.71
  • 86.71
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.97e3
  • 4.97e3
  • 6.05e3
  • 6.18e3
  • 7.38e3
83.35
  • 83.35
  • 79.76
  • 79.31
  • 75.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
81.09
  • 81.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.71
  • 80.71
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
6.00e3
  • 6.00e3
  • 6.10e3
  • 6.60e3
  • 6.82e3
  • 8.14e3
  • 8.23e3
79.92
  • 79.92
  • 79.58
  • 77.91
  • 77.18
  • 72.76
  • 72.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.08e3
  • 6.08e3
79.66
  • 79.66
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.28e3
  • 6.28e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
6.45e3
  • 6.45e3
  • 6.92e3
  • 7.41e3
  • 7.56e3
  • 8.74e3
  • 9.32e3
  • 1.02e4
  • 1.05e4
  • 1.09e4
  • 1.27e4
78.39
  • 78.39
  • 76.84
  • 75.19
  • 74.68
  • 70.75
  • 68.81
  • 65.79
  • 64.79
  • 63.35
  • 57.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.57e3
  • 6.57e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
77.49
  • 77.49
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.90
  • 76.90
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.61
  • 76.61
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.27e3
  • 7.27e3
75.66
  • 75.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.10e3
  • 8.10e3
  • 9.35e3
72.88
  • 72.88
  • 68.69
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.26e3
  • 8.26e3
  • 1.06e4
72.34
  • 72.34
  • 64.63
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.14
  • 71.14
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.65e3
  • 8.65e3
  • 8.85e3
  • 8.93e3
71.04
  • 71.04
  • 70.35
  • 70.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.20
  • 70.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa1 geneCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000069807.

Cross-references

EnsemblENSDARG00000069807 (zdhhc18a)
ZFINZDB-GENE-060929-424 (zdhhc18a), ZDB-GENE-121116-1 (pigv)
EMBLBX649265
Uniprot/SPTREMBLE7FH11, E7FH11_DANRE, F1Q6I2, F1Q6I2_DANRE

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